Literature DB >> 29654789

Detection of four regulated grapevine viruses in a qualitative, single tube real-time PCR with melting curve analysis.

M Aloisio1, M Morelli2, V Elicio3, P Saldarelli2, B Ura4, B Bortot4, G M Severini4, A Minafra5.   

Abstract

The detection of the four grapevine viruses (GLRaV-1, GLRaV-3, GFLV and ArMV) regulated in European Union plant material certification, requires sensitive and specific diagnostic tools. A strategy of simultaneous detection in a real-time single tube amplification was developed, based on the EvaGreen binding dye. The melting curve analysis (MCA) of the amplicons allows a qualitative detection of the four different virus targets in multiplex analysis. A plasmid dilution assay calculated an analytical sensitivity with an amplification threshold up to 100 copies of the target sequences. A small cohort of field grapevine samples, with a known status of infection by mixtures of the target viruses or free of them, respectively, was successfully tested for the evaluation of the amplicons Tm.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  EvaGreen; Grapevine; Melting curve; Multiplex Real-time PCR; Viruses

Mesh:

Year:  2018        PMID: 29654789     DOI: 10.1016/j.jviromet.2018.04.008

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  5 in total

1.  Lateral Flow Immunoassay for Rapid Detection of Grapevine Leafroll-Associated Virus.

Authors:  Nadezhda A Byzova; Svetlana V Vinogradova; Elena V Porotikova; Uliana D Terekhova; Anatoly V Zherdev; Boris B Dzantiev
Journal:  Biosensors (Basel)       Date:  2018-11-15

Review 2.  Recent Advances on the Multiplex Molecular Detection of Plant Viruses and Viroids.

Authors:  Vicente Pallás; Jesus A Sánchez-Navarro; Delano James
Journal:  Front Microbiol       Date:  2018-09-10       Impact factor: 5.640

3.  Affimer reagents as tools in diagnosing plant virus diseases.

Authors:  Emma L Hesketh; Christian Tiede; Hope Adamson; Thomas L Adams; Matthew J Byrne; Yulia Meshcheriakova; Inga Kruse; Michael J McPherson; George P Lomonossoff; Darren C Tomlinson; Neil A Ranson
Journal:  Sci Rep       Date:  2019-05-17       Impact factor: 4.379

4.  Detection of Eight Respiratory Bacterial Pathogens Based on Multiplex Real-Time PCR with Fluorescence Melting Curve Analysis.

Authors:  Liuyang Hu; Bing Han; Qin Tong; Hui Xiao; Donglin Cao
Journal:  Can J Infect Dis Med Microbiol       Date:  2020-02-26       Impact factor: 2.471

5.  One-step real-time multiplex reverse transcription-polymerase chain reaction assay with melt curve analysis for detection of potato leafroll virus, potato virus S, potato virus X, and potato virus Y.

Authors:  Nobuya Onozuka; Takehiro Ohki; Norikuni Oka; Tetsuo Maoka
Journal:  Virol J       Date:  2021-06-29       Impact factor: 4.099

  5 in total

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