Literature DB >> 29651927

A two-stage approach to estimate spatial and spatio-temporal disease risks in the presence of local discontinuities and clusters.

A Adin1,2, D Lee3, T Goicoa1,2,4, María Dolores Ugarte1,2.   

Abstract

Disease risk maps for areal unit data are often estimated from Poisson mixed models with local spatial smoothing, for example by incorporating random effects with a conditional autoregressive prior distribution. However, one of the limitations is that local discontinuities in the spatial pattern are not usually modelled, leading to over-smoothing of the risk maps and a masking of clusters of hot/coldspot areas. In this paper, we propose a novel two-stage approach to estimate and map disease risk in the presence of such local discontinuities and clusters. We propose approaches in both spatial and spatio-temporal domains, where for the latter the clusters can either be fixed or allowed to vary over time. In the first stage, we apply an agglomerative hierarchical clustering algorithm to training data to provide sets of potential clusters, and in the second stage, a two-level spatial or spatio-temporal model is applied to each potential cluster configuration. The superiority of the proposed approach with regard to a previous proposal is shown by simulation, and the methodology is applied to two important public health problems in Spain, namely stomach cancer mortality across Spain and brain cancer incidence in the Navarre and Basque Country regions of Spain.

Entities:  

Keywords:  Clustering; disease mapping; integrated nested Laplace approximations; risk smoothing

Mesh:

Year:  2018        PMID: 29651927     DOI: 10.1177/0962280218767975

Source DB:  PubMed          Journal:  Stat Methods Med Res        ISSN: 0962-2802            Impact factor:   3.021


  6 in total

1.  Spatio-temporal disease risk estimation using clustering-based adjacency modelling.

Authors:  Xueqing Yin; Gary Napier; Craig Anderson; Duncan Lee
Journal:  Stat Methods Med Res       Date:  2022-03-14       Impact factor: 2.494

2.  Reclaiming independence in spatial-clustering datasets: A series of data-driven spatial weights matrices.

Authors:  Wei Wang; Xiong Xiao; Jian Qian; Shiqi Chen; Fang Liao; Fei Yin; Tao Zhang; Xiaosong Li; Yue Ma
Journal:  Stat Med       Date:  2022-03-28       Impact factor: 2.497

3.  Exploring the risk factors of COVID-19 Delta variant in the United States based on Bayesian spatio-temporal analysis.

Authors:  Shaopei Ma; Xueliang Zhang; Kai Wang; Liping Zhang; Lei Wang; Ting Zeng; Man-Lai Tang; Maozai Tian
Journal:  Transbound Emerg Dis       Date:  2022-07-09       Impact factor: 4.521

4.  Bayesian spatiotemporal forecasting and mapping of COVID-19 risk with application to West Java Province, Indonesia.

Authors:  I Gede Nyoman M Jaya; Henk Folmer
Journal:  J Reg Sci       Date:  2021-05-07

Review 5.  Advances in spatiotemporal models for non-communicable disease surveillance.

Authors:  Marta Blangiardo; Areti Boulieri; Peter Diggle; Frédéric B Piel; Gavin Shaddick; Paul Elliott
Journal:  Int J Epidemiol       Date:  2020-04-01       Impact factor: 7.196

6.  Spatio-temporal epidemiology of the tuberculosis incidence rate in Iran 2008 to 2018.

Authors:  Behzad Kiani; Amene Raouf Rahmati; Robert Bergquist; Soheil Hashtarkhani; Neda Firouraghi; Nasser Bagheri; Elham Moghaddas; Alireza Mohammadi
Journal:  BMC Public Health       Date:  2021-06-07       Impact factor: 3.295

  6 in total

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