Literature DB >> 29651183

Annotation and De Novo Sequence Characterization of Extracellular β-Fructofuranosidase from Penicillium chrysogenum Strain HKF42.

Vaibhav V Gujar1,2, Priya Fuke1, Anshuman A Khardenavis1,2, Hemant J Purohit1.   

Abstract

The genome of a fungal strain Penicillium chrysogenum strain HKF42, which can grow on 20% sucrose has been annotated for 7595 protein coding sequences. On mining of CAZymes, we could annotate a β-fructofuranosidase gene responsible for fructo-oligosaccharides (FOS) synthesis which is a known prebiotic. The enzyme activity was demonstrated and validated with the generation of FOS as kestose and nystose.

Entities:  

Keywords:  Fructo-oligosaccharides; Penicillium; Prebiotic; β-Fructofuranosidase

Year:  2018        PMID： 29651183      PMCID： PMC5891470          DOI： 10.1007/s12088-017-0704-y

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN： 0046-8991            Impact factor:   2.461


  14 in total

1.  Eukaryotic gene prediction using GeneMark.hmm-E and GeneMark-ES.

Authors:  Mark Borodovsky; Alex Lomsadze
Journal:  Curr Protoc Bioinformatics       Date:  2011-09

2.  One-pot production of fructooligosaccharides by a Saccharomyces cerevisiae strain expressing an engineered invertase.

Authors:  Julia Marín-Navarro; David Talens-Perales; Julio Polaina
Journal:  Appl Microbiol Biotechnol       Date:  2014-12-31       Impact factor: 4.813

3.  Fructooligosaccharides synthesis by highly stable immobilized β-fructofuranosidase from Aspergillus aculeatus.

Authors:  André S G Lorenzoni; Luiza F Aydos; Manuela P Klein; Rafael C Rodrigues; Plinho F Hertz
Journal:  Carbohydr Polym       Date:  2013-12-21       Impact factor: 9.381

Review 4.  Fructo-oligosaccharides: Production, Purification and Potential Applications.

Authors:  Vandana Bali; Parmjit S Panesar; Manab B Bera; Reeba Panesar
Journal:  Crit Rev Food Sci Nutr       Date:  2015       Impact factor: 11.176

5.  Draft genome sequence of Talaromyces verruculosus ("Penicillium verruculosum") strain TS63-9, a fungus with great potential for industrial production of polysaccharide-degrading enzymes.

Authors:  Liwei Hu; Rahil Taujale; Fang Liu; Jizhen Song; Qisheng Yin; Yanling Zhang; Jianhua Guo; Yanbin Yin
Journal:  J Biotechnol       Date:  2015-12-18       Impact factor: 3.307

6.  Characterization of antibacterial activity of bikaverin from Fusarium sp. HKF15.

Authors:  Radhika Deshmukh; Anoop Mathew; Hemant J Purohit
Journal:  J Biosci Bioeng       Date:  2013-10-31       Impact factor: 2.894

7.  Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment.

Authors:  Jianyi Yang; Ambrish Roy; Yang Zhang
Journal:  Bioinformatics       Date:  2013-08-23       Impact factor: 6.937

8.  dbCAN: a web resource for automated carbohydrate-active enzyme annotation.

Authors:  Yanbin Yin; Xizeng Mao; Jincai Yang; Xin Chen; Fenglou Mao; Ying Xu
Journal:  Nucleic Acids Res       Date:  2012-05-29       Impact factor: 16.971

9.  I-TASSER server: new development for protein structure and function predictions.

Authors:  Jianyi Yang; Yang Zhang
Journal:  Nucleic Acids Res       Date:  2015-04-16       Impact factor: 16.971

10.  SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.

Authors:  Ruibang Luo; Binghang Liu; Yinlong Xie; Zhenyu Li; Weihua Huang; Jianying Yuan; Guangzhu He; Yanxiang Chen; Qi Pan; Yunjie Liu; Jingbo Tang; Gengxiong Wu; Hao Zhang; Yujian Shi; Yong Liu; Chang Yu; Bo Wang; Yao Lu; Changlei Han; David W Cheung; Siu-Ming Yiu; Shaoliang Peng; Zhu Xiaoqian; Guangming Liu; Xiangke Liao; Yingrui Li; Huanming Yang; Jian Wang; Tak-Wah Lam; Jun Wang
Journal:  Gigascience       Date:  2012-12-27       Impact factor: 6.524
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.