Literature DB >> 29638170

Seven Salmonella Typhimurium Outbreaks in Australia Linked by Trace-Back and Whole Genome Sequencing.

Laura Ford1,2, Qinning Wang3, Russell Stafford4, Kelly-Anne Ressler5, Sophie Norton6, Craig Shadbolt7, Kirsty Hope8, Neil Franklin8, Radomir Krsteski2, Adrienne Carswell2, Glen P Carter9, Torsten Seemann9, Peter Howard3, Mary Valcanis10, Cristina Fabiola Sotomayor Castillo3,11,12,13, John Bates14, Kathryn Glass1, Deborah A Williamson9,10, Vitali Sintchenko3,13, Benjamin P Howden9,10,15, Martyn D Kirk1.   

Abstract

Salmonella Typhimurium is a common cause of foodborne illness in Australia. We report on seven outbreaks of Salmonella Typhimurium multilocus variable-number tandem-repeat analysis (MLVA) 03-26-13-08-523 (European convention 2-24-12-7-0212) in three Australian states and territories investigated between November 2015 and March 2016. We identified a common egg grading facility in five of the outbreaks. While no Salmonella Typhimurium was detected at the grading facility and eggs could not be traced back to a particular farm, whole genome sequencing (WGS) of isolates from cases from all seven outbreaks indicated a common source. WGS was able to provide higher discriminatory power than MLVA and will likely link more Salmonella Typhimurium cases between states and territories in the future. National harmonization of Salmonella surveillance is important for effective implementation of WGS for Salmonella outbreak investigations.

Entities:  

Keywords:  Salmonella Typhimurium; eggs; outbreaks; trace-back; whole genome sequencing

Mesh:

Year:  2018        PMID: 29638170     DOI: 10.1089/fpd.2017.2353

Source DB:  PubMed          Journal:  Foodborne Pathog Dis        ISSN: 1535-3141            Impact factor:   3.171


  7 in total

1.  Investigating Outbreaks of Salmonella Typhimurium Using Case-Control Studies, with a Reference to the One Health Approach.

Authors:  Katrin Gaardbo Kuhn; Steen Ethelberg
Journal:  Methods Mol Biol       Date:  2021

2.  Cost of whole genome sequencing for non-typhoidal Salmonella enterica.

Authors:  Laura Ford; Kathryn Glass; Deborah A Williamson; Vitali Sintchenko; Jennifer M B Robson; Emily Lancsar; Russell Stafford; Martyn D Kirk
Journal:  PLoS One       Date:  2021-03-19       Impact factor: 3.240

3.  Evaluation of WGS-subtyping methods for epidemiological surveillance of foodborne salmonellosis.

Authors:  Manal Mohammed; Salina Thapa
Journal:  One Health Outlook       Date:  2020-07-06

4.  Whole genome sequencing and protein structure analyses of target genes for the detection of Salmonella.

Authors:  Lijun Hu; Guojie Cao; Eric W Brown; Marc W Allard; Li M Ma; Guodong Zhang
Journal:  Sci Rep       Date:  2021-10-22       Impact factor: 4.379

5.  Phenotypic characterization and genome analysis of a novel Salmonella Typhimurium phage having unique tail fiber genes.

Authors:  Sadia Sattar; Inam Ullah; Sofia Khanum; Marc Bailie; Bushra Shamsi; Ibrar Ahmed; Syed Tahir Abbas Shah; Sundus Javed; Aamir Ghafoor; Amna Pervaiz; Fakiha Sohail; Naseer Ali Shah; Kaleem Imdad; Nazish Bostan; Eric Altermann
Journal:  Sci Rep       Date:  2022-04-06       Impact factor: 4.379

6.  Rapid Multilateral and Integrated Public Health Response to a Cross-City Outbreak of Salmonella Enteritidis Infections Combining Analytical, Molecular, and Genomic Epidemiological Analysis.

Authors:  Min Jiang; Chao Yang; Patrick S L Kwan; Liping Zhang; Hang Fan; Yujuan Jin; Lifang Sun; Hongyu Chen; Baisheng Li; Qiuxia Chen; Yarong Wu; Yan Guo; Yuanguo Shi; Min Liao; Xiaolu Shi; Jianping Liu; Lijuan Jiang; Rui Cai; Yinhua Deng; Qun Sun; Ruifu Yang; Qiaoli Zhang; Yujun Cui; Qinghua Hu
Journal:  Front Microbiol       Date:  2022-05-04       Impact factor: 5.640

7.  Enhancing genomics-based outbreak detection of endemic Salmonella enterica serovar Typhimurium using dynamic thresholds.

Authors:  Michael Payne; Sophie Octavia; Laurence Don Wai Luu; Cristina Sotomayor-Castillo; Qinning Wang; Alfred Chin Yen Tay; Vitali Sintchenko; Mark M Tanaka; Ruiting Lan
Journal:  Microb Genom       Date:  2021-06
  7 in total

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