Literature DB >> 29632975

Agromyces mangrovi sp. nov., a Novel Actinobacterium Isolated from Mangrove Soil.

Ruijun Wang1, Can Chen1, Yue Su1, Xiaoyun Yu2, Chongya Zhang1, Geyi Fu1, Shuaibo Han2, Xianmao Pan3, Junming Qiu3, Xiaopin Li4, Min Wu5,6.   

Abstract

A novel, Gram-stain-positive, microaerophilic to aerobic, non-endospore-forming, no-motile and rod-shaped bacterium designated Q14T was isolated from mangrove soil samples collected on chengmai, Hainan province, China. Strain Q14T was able to grow at 10-40 °C (optimum 30 °C), pH 5.5-10.0 (optimum 6.5-8.0) and with 0.5-6% (w/v) NaCl (optimum 1%). The genomic DNA G+C content was 70.1%. The chemotaxonomic analysis showed that the predominant isoprenoid quinone was MK-12 and the major fatty acids were anteiso-C15:0, iso-C17:0 and anteiso-C17:0. The major polar lipids of strain Q14T were diphosphatidylglycerol, phosphatidylglycerol and one glycolipid. The strain Q14T contained 2,4-diaminobutylic acid (A2bu), alanine acid, glutamic acid and glycine in the peptidoglycans. The phylogenetic analysis and DNA-DNA hybridization, along with the phenotypic and chemotaxonomic characteristics, indicate that strain Q14T as a novel species of the genus Agromyces, for which the name Agromyces mangrovi sp. nov. is proposed. The type strain is Q14T (= MCCC 1K03191T = KCTC 39814T).

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Year:  2018        PMID: 29632975     DOI: 10.1007/s00284-018-1476-2

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  28 in total

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Journal:  Lett Appl Microbiol       Date:  1991-09       Impact factor: 2.858

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3.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

4.  Agromyces tropicus sp. nov., isolated from soil.

Authors:  Chitti Thawai; Somboon Tanasupawat; Khanit Suwanborirux; Takuji Kudo
Journal:  Int J Syst Evol Microbiol       Date:  2010-04-30       Impact factor: 2.747

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

7.  Agromyces binzhouensis sp. nov., an actinobacterium isolated from a coastal wetland of the Yellow River Delta.

Authors:  Zhirong Chen; Yingying Guan; Jingjing Wang; Jing Li
Journal:  Int J Syst Evol Microbiol       Date:  2016-03-15       Impact factor: 2.747

8.  Devosia pacifica sp. nov., isolated from deep-sea sediment.

Authors:  Yan-Yu Jia; Cong Sun; Jie Pan; Wei-Yan Zhang; Xin-Qi Zhang; Ying-Yi Huo; Xu-Fen Zhu; Min Wu
Journal:  Int J Syst Evol Microbiol       Date:  2014-05-14       Impact factor: 2.747

9.  Agromyces iriomotensis sp. nov. and Agromyces subtropicus sp. nov., isolated from soil.

Authors:  Moriyuki Hamada; Chiyo Shibata; Yuumi Ishida; Tomohiko Tamura; Hideki Yamamura; Masayuki Hayakawa; Ken-Ichiro Suzuki
Journal:  Int J Syst Evol Microbiol       Date:  2013-11-15       Impact factor: 2.747

10.  Agromyces ulmi sp. nov., a xylanolytic bacterium isolated from Ulmus nigra in Spain.

Authors:  Raúl Rivas; Martha E Trujillo; Pedro F Mateos; Eustoquio Martínez-Molina; Encarna Velázquez
Journal:  Int J Syst Evol Microbiol       Date:  2004-11       Impact factor: 2.747

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