Literature DB >> 29629714

Discovering transcriptional signatures of disease for diagnosis versus mechanism.

Julie G Burel1, Bjoern Peters1.   

Abstract

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Year:  2018        PMID： 29629714      PMCID： PMC6478603          DOI： 10.1038/nri.2018.26

Source DB:  PubMed          Journal:  Nat Rev Immunol        ISSN： 1474-1733            Impact factor:   53.106


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  10 in total

1.  Genome-wide expression for diagnosis of pulmonary tuberculosis: a multicohort analysis.

Authors:  Timothy E Sweeney; Lindsay Braviak; Cristina M Tato; Purvesh Khatri
Journal:  Lancet Respir Med       Date:  2016-02-20       Impact factor: 30.700

2.  IL-32 is a molecular marker of a host defense network in human tuberculosis.

Authors:  Dennis Montoya; Megan S Inkeles; Phillip T Liu; Susan Realegeno; Rosane M B Teles; Poorva Vaidya; Marcos A Munoz; Mirjam Schenk; William R Swindell; Rene Chun; Kathryn Zavala; Martin Hewison; John S Adams; Steve Horvath; Matteo Pellegrini; Barry R Bloom; Robert L Modlin
Journal:  Sci Transl Med       Date:  2014-08-20       Impact factor: 17.956

3.  Common patterns and disease-related signatures in tuberculosis and sarcoidosis.

Authors:  Jeroen Maertzdorf; January Weiner; Hans-Joachim Mollenkopf; Torsten Bauer; Antje Prasse; Joachim Müller-Quernheim; Stefan H E Kaufmann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-30       Impact factor: 11.205

4.  Caseation of human tuberculosis granulomas correlates with elevated host lipid metabolism.

Authors:  Mi-Jeong Kim; Helen C Wainwright; Michael Locketz; Linda-Gail Bekker; Gabriele B Walther; Corneli Dittrich; Annalie Visser; Wei Wang; Fong-Fu Hsu; Ursula Wiehart; Liana Tsenova; Gilla Kaplan; David G Russell
Journal:  EMBO Mol Med       Date:  2010-07       Impact factor: 12.137

5.  Transcriptomic Analysis of CD4+ T Cells Reveals Novel Immune Signatures of Latent Tuberculosis.

Authors:  Julie G Burel; Cecilia S Lindestam Arlehamn; Nabeela Khan; Grégory Seumois; Jason A Greenbaum; Randy Taplitz; Robert H Gilman; Mayuko Saito; Pandurangan Vijayanand; Alessandro Sette; Bjoern Peters
Journal:  J Immunol       Date:  2018-03-30       Impact factor: 5.422

6.  An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis.

Authors:  Matthew P R Berry; Christine M Graham; Finlay W McNab; Zhaohui Xu; Susannah A A Bloch; Tolu Oni; Katalin A Wilkinson; Romain Banchereau; Jason Skinner; Robert J Wilkinson; Charles Quinn; Derek Blankenship; Ranju Dhawan; John J Cush; Asuncion Mejias; Octavio Ramilo; Onn M Kon; Virginia Pascual; Jacques Banchereau; Damien Chaussabel; Anne O'Garra
Journal:  Nature       Date:  2010-08-19       Impact factor: 49.962

7.  Excessive Cytolytic Responses Predict Tuberculosis Relapse After Apparently Successful Treatment.

Authors:  Jacqueline M Cliff; Jang-Eun Cho; Ji-Sook Lee; Katharina Ronacher; Elizabeth C King; Paul van Helden; Gerhard Walzl; Hazel M Dockrell
Journal:  J Infect Dis       Date:  2015-09-07       Impact factor: 5.226

8.  Blood transcriptomic diagnosis of pulmonary and extrapulmonary tuberculosis.

Authors:  Jennifer K Roe; Niclas Thomas; Eliza Gil; Katharine Best; Evdokia Tsaliki; Stephen Morris-Jones; Sian Stafford; Nandi Simpson; Karolina D Witt; Benjamin Chain; Robert F Miller; Adrian Martineau; Mahdad Noursadeghi
Journal:  JCI Insight       Date:  2016-10-06

9.  Detection of tuberculosis in HIV-infected and -uninfected African adults using whole blood RNA expression signatures: a case-control study.

Authors:  Myrsini Kaforou; Victoria J Wright; Tolu Oni; Neil French; Suzanne T Anderson; Nonzwakazi Bangani; Claire M Banwell; Andrew J Brent; Amelia C Crampin; Hazel M Dockrell; Brian Eley; Robert S Heyderman; Martin L Hibberd; Florian Kern; Paul R Langford; Ling Ling; Marc Mendelson; Tom H Ottenhoff; Femia Zgambo; Robert J Wilkinson; Lachlan J Coin; Michael Levin
Journal:  PLoS Med       Date:  2013-10-22       Impact factor: 11.069

10.  A blood RNA signature for tuberculosis disease risk: a prospective cohort study.

Authors:  Daniel E Zak; Adam Penn-Nicholson; Thomas J Scriba; Ethan Thompson; Sara Suliman; Lynn M Amon; Hassan Mahomed; Mzwandile Erasmus; Wendy Whatney; Gregory D Hussey; Deborah Abrahams; Fazlin Kafaar; Tony Hawkridge; Suzanne Verver; E Jane Hughes; Martin Ota; Jayne Sutherland; Rawleigh Howe; Hazel M Dockrell; W Henry Boom; Bonnie Thiel; Tom H M Ottenhoff; Harriet Mayanja-Kizza; Amelia C Crampin; Katrina Downing; Mark Hatherill; Joe Valvo; Smitha Shankar; Shreemanta K Parida; Stefan H E Kaufmann; Gerhard Walzl; Alan Aderem; Willem A Hanekom
Journal:  Lancet       Date:  2016-03-24       Impact factor: 79.321
  10 in total
  7 in total

Review 1.  Atherosclerosis in the single-cell era.

Authors:  Holger Winkels; Erik Ehinger; Yanal Ghosheh; Dennis Wolf; Klaus Ley
Journal:  Curr Opin Lipidol       Date:  2018-10       Impact factor: 4.776

2.  Meta-Analysis of Whole Blood Transcriptome Datasets Characterizes the Immune Response of Respiratory Syncytial Virus Infection in Children.

Authors:  Qianyu Feng; Shujin Lin; Huifang Liu; Bin Yang; Lifen Han; Xiao Han; Lili Xu; Zhengde Xie
Journal:  Front Cell Infect Microbiol       Date:  2022-04-13       Impact factor: 6.073

Review 3.  Autologous Hematopoietic Stem Cell Transplantation for Autoimmune Diseases: From Mechanistic Insights to Biomarkers.

Authors:  Kelen Cristina Ribeiro Malmegrim; João Rodrigues Lima-Júnior; Lucas Coelho Marlière Arruda; Júlia Teixeira Cottas de Azevedo; Gislane Lelis Vilela de Oliveira; Maria Carolina Oliveira
Journal:  Front Immunol       Date:  2018-11-16       Impact factor: 7.561

4.  Performance of host blood transcriptomic signatures for diagnosing and predicting progression to tuberculosis disease in HIV-negative adults and adolescents: a systematic review protocol.

Authors:  Thomas Scriba; Mark Hatherill; Humphrey Mulenga; Erick Wekesa Bunyasi; Stanley Kimbung Mbandi; Simon C Mendelsohn; Benjamin Kagina; Adam Penn-Nicholson
Journal:  BMJ Open       Date:  2019-05-22       Impact factor: 2.692

5.  Meta-Analysis of Peripheral Blood Transcriptome Datasets Reveals a Biomarker Panel for Tuberculosis in Patients Infected With HIV.

Authors:  Yahong Chen; Qiaowen Wang; Shujin Lin; Jinglan Lai; Jing Lin; Wen Ao; Xiao Han; Hanhui Ye
Journal:  Front Cell Infect Microbiol       Date:  2021-03-19       Impact factor: 5.293

Review 6.  Host Transcriptomics as a Tool to Identify Diagnostic and Mechanistic Immune Signatures of Tuberculosis.

Authors:  Julie G Burel; Mariana Babor; Mikhail Pomaznoy; Cecilia S Lindestam Arlehamn; Nabeela Khan; Alessandro Sette; Bjoern Peters
Journal:  Front Immunol       Date:  2019-02-19       Impact factor: 7.561

Review 7.  Microbiome applications for pathology: challenges of low microbial biomass samples during diagnostic testing.

Authors:  Caitlin A Selway; Raphael Eisenhofer; Laura S Weyrich
Journal:  J Pathol Clin Res       Date:  2020-01-15
  7 in total

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