Literature DB >> 29628149

Distribution of rotavirus genotypes associated with acute diarrhoea in Zimbabwean children less than five years old before and after rotavirus vaccine introduction.

Arnold Mukaratirwa1, Chipo Berejena2, Pasipanodya Nziramasanga2, Ismail Ticklay3, Archebald Gonah4, Kusum Nathoo3, Portia Manangazira5, Douglas Mangwanya6, Joan Marembo7, Jason M Mwenda8, Goitom Weldegebriel9, Mapaseka Seheri10, Jacqueline E Tate11, Catherine Yen11, Umesh Parashar11, Hilda Mujuru3.   

Abstract

BACKGROUND: Sentinel surveillance for diarrhoea is important to monitor changes in rotavirus epidemiological trends and circulating genotypes among children under 5 years before and after vaccine introduction. The Zimbabwe Ministry of Health and Child Care introduced rotavirus vaccine in national immunization program in May 2014.
METHODS: Active hospital-based surveillance for diarrhoea was conducted at 3 sentinel sites from 2008 to 2016. Children aged less than 5 years, who presented with acute gastroenteritis as a primary illness and who were admitted to a hospital ward or treated at the emergency unit, were enrolled and had a stool specimen collected and tested for rotavirus by enzyme immunoassay (EIA). Genotyping of positive stools was performed using reverse-transcription polymerase chain reaction and genotyping assays. Pre-vaccine introduction, 10% of all positive stool specimens were genotyped and all adequate positive stools were genotyped post-vaccine introduction.
RESULTS: During the pre-vaccine period, a total of 6491 acute gastroenteritis stools were collected, of which 3016 (46%) tested positive for rotavirus and 312 (10%) of the rotavirus positive stools were genotyped. During the post-vaccine period, a total of 3750 acute gastroenteritis stools were collected, of which 937 (25%) tested positive for rotavirus and 784 (84%) were genotyped. During the pre-vaccine introduction the most frequent genotype was G9P[8] (21%) followed by G2P[4] (12%), G1P[8] (6%), G2P[6] (5%), G12P[6] (4%), G9P[6] (3%) and G8P[4] (3%). G1P[8] (30%) was most dominant two years after vaccine introduction followed by G9P[6] (20%), G2P[4] (15%), G9P[8] (11%) and G1P[6] (4%).
CONCLUSION: The decline in positivity rate is an indication of early vaccine impact. Diversity of circulating strains underscores the importance of continued monitoring and strain surveillance after vaccine introduction.
Copyright © 2018. Published by Elsevier Ltd.

Entities:  

Keywords:  Genotypes vaccine; Rotavirus; Surveillance; Zimbabwe

Mesh:

Substances:

Year:  2018        PMID: 29628149     DOI: 10.1016/j.vaccine.2018.03.069

Source DB:  PubMed          Journal:  Vaccine        ISSN: 0264-410X            Impact factor:   3.641


  4 in total

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Authors:  Paymaneh Atabakhsh; Mohammad Kargar; Abbas Doosti
Journal:  Braz J Microbiol       Date:  2021-02-18       Impact factor: 2.476

2.  Generation of Simian Rotavirus Reassortants with VP4- and VP7-Encoding Genome Segments from Human Strains Circulating in Africa Using Reverse Genetics.

Authors:  Alexander Falkenhagen; Corinna Patzina-Mehling; Ashish K Gadicherla; Amy Strydom; Hester G O'Neill; Reimar Johne
Journal:  Viruses       Date:  2020-02-11       Impact factor: 5.048

3.  Rotavirus group A genotype circulation patterns across Kenya before and after nationwide vaccine introduction, 2010-2018.

Authors:  Mike J Mwanga; Betty E Owor; John B Ochieng; Mwanajuma H Ngama; Billy Ogwel; Clayton Onyango; Jane Juma; Regina Njeru; Elijah Gicheru; Grieven P Otieno; Sammy Khagayi; Charles N Agoti; Godfrey M Bigogo; Richard Omore; O Yaw Addo; Seheri Mapaseka; Jacqueline E Tate; Umesh D Parashar; Elizabeth Hunsperger; Jennifer R Verani; Robert F Breiman; D James Nokes
Journal:  BMC Infect Dis       Date:  2020-07-13       Impact factor: 3.090

4.  Rotavirus breakthrough infections responsible for gastroenteritis in vaccinated infants who presented with acute diarrhoea at University Teaching Hospitals, Children's Hospital in 2016, in Lusaka Zambia.

Authors:  Julia Simwaka; Mapaseka Seheri; Gina Mulundu; Patrick Kaonga; Jason M Mwenda; Roma Chilengi; Evans Mpabalwani; Sody Munsaka
Journal:  PLoS One       Date:  2021-02-04       Impact factor: 3.240

  4 in total

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