Literature DB >> 29627885

Establishment of Aromatic Pairs at the Surface of Chondroitinase ABC I: the Effect on Activity and Stability.

Mohammad Esmaeil Shahaboddin1, Khosro Khajeh2, Abolfazl Golestani3.   

Abstract

Removal of chondroitin sulfate glycosaminoglycan (GAG) chains with chondroitinase ABC I (chABC I) in CNS injury models promotes both saxon regeneration and plasticity. It has been suggested that direct interaction between an aromatic pair appears to contribute about - 1.3 kcal/mol to the stability of a folded protein, so introducing an aromatic pair by point mutation might increase the enzyme activity and thermal stability as in the case of mesophilic xylanase, although using this approach destabilized T4 lysozyme. In this study, we used site-directed mutagenesis to investigate the effect of new aromatic pairs on activity and stability of chABC I. We replaced Ile295, Ser581, and Gly730 adjacent to pre-existing aromatic residues with Tyr to obtain new aromatic pairs, i.e., Tyr295/His372, Tyr576/Tyr581, and Tyr623/Tyr730. Results showed that Km values of S581Y and G730Y variants decreased relative to wild-type enzyme while their catalytic efficiency (kcat/Km) increased but I295Y variant was inactive. Also, long-term and thermal stability of the active mutants was decreased. Fluorescence and circular dichroism studies showed that these mutations resulted in a more flexible enzyme structures: a finding which was confirmed by thermal and limited proteolytic studies. In conclusion, the activity of chABC I can be improved by introducing appropriate aromatic pairs at the enzyme surface. This approach did not provide any promising results regarding the enzyme stability.

Entities:  

Keywords:  Aromatic pair; Catalytic efficiency; Chondroitinase ABC I; Circular dichroism; Fluorometric assay; Limited trypsinolysis

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Year:  2018        PMID: 29627885     DOI: 10.1007/s12010-018-2741-3

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   2.926


  3 in total

1.  N∆89 and C∆274 Truncated Enzymes of Chondroitinase ABC I Regain More Imperturbable Microenvironments Around Structural Components in Comparison to their Wild Type.

Authors:  Hossein Omidi-Ardali; Mahdi Aminian; Abolfazl Golestani; Mohammad Esmaeil Shahaboddin; Monireh Maleki
Journal:  Protein J       Date:  2019-04       Impact factor: 2.371

Review 2.  The structures and applications of microbial chondroitin AC lyase.

Authors:  Xiao-Man Fan; Li-Jian Zhou; Jia-Ying Huang; Ye-Wang Zhang
Journal:  World J Microbiol Biotechnol       Date:  2022-08-23       Impact factor: 4.253

3.  Reengineering biocatalysts: Computational redesign of chondroitinase ABC improves efficacy and stability.

Authors:  Marian H Hettiaratchi; Matthew J O'Meara; Teresa R O'Meara; Andrew J Pickering; Nitzan Letko-Khait; Molly S Shoichet
Journal:  Sci Adv       Date:  2020-08-19       Impact factor: 14.136

  3 in total

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