Literature DB >> 29623398

Complete Genome Sequence of Alcaligenes Faecalis Strain JQ135, a Bacterium Capable of Efficiently Degrading Nicotinic Acid.

Yanting Zhang1, Qing Chen2, Junbin Ji1, Lingling Zhao1, Lei Zhang3, Jiguo Qiu4, Jian He1.   

Abstract

Nicotinic acid (NA), known as vitamin B3, is ubiquitous in nature and plays an important role in living organisms. The microbial catabolism of NA is highly diverse. However, the NA degradation by Alcaligenes faecalis strains has been poorly investigated. In this study, we report the complete genome sequence of A. faecalis JQ135 (4.08 Mbp) and several essential genes for NA degradation. This genome sequence will facilitate to elucidate the molecular metabolism of NA and advance the potential biotechnological applications of A. faecalis strains.

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Year:  2018        PMID： 29623398     DOI： 10.1007/s00284-018-1486-0

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN： 0343-8651            Impact factor:   2.188


  17 in total

1.  Bacterial degradation of nicotinic acid.

Authors:  I HARARY
Journal:  Nature       Date:  1956-02-18       Impact factor: 49.962

2.  Third generation DNA sequencing: pacific biosciences' single molecule real time technology.

Authors:  Alice McCarthy
Journal:  Chem Biol       Date:  2010-07-30

3.  Electron transfer of Pseudomonas aeruginosa CP1 in electrochemical reduction of nitric oxide.

Authors:  Shaofeng Zhou; Shaobin Huang; Jiaxin He; Han Li; Yongqing Zhang
Journal:  Bioresour Technol       Date:  2016-07-11       Impact factor: 9.642

4.  The bacterial oxidation of nicotinic acid. N-formylmaleamic and N-formylfumaramic acids.

Authors:  E J Behrman
Journal:  Arch Microbiol       Date:  1976-10-11       Impact factor: 2.552

5.  The complete genome sequence of Alcaligenes faecalis ZD02, a novel potential bionematocide.

Authors:  Shouyong Ju; Jinshui Zheng; Jian Lin; Ce Geng; Lei Zhu; Ziyu Guan; Ziqiang Zheng; Ming Sun
Journal:  J Biotechnol       Date:  2015-12-04       Impact factor: 3.307

6.  Deciphering the genetic determinants for aerobic nicotinic acid degradation: the nic cluster from Pseudomonas putida KT2440.

Authors:  José I Jiménez; Angeles Canales; Jesús Jiménez-Barbero; Krzysztof Ginalski; Leszek Rychlewski; José L García; Eduardo Díaz
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-04       Impact factor: 11.205

7.  Enzymatic reduction of levulinic acid by engineering the substrate specificity of 3-hydroxybutyrate dehydrogenase.

Authors:  Young Joo Yeon; Hyung-Yeon Park; Young Je Yoo
Journal:  Bioresour Technol       Date:  2013-02-09       Impact factor: 9.642

8.  Exogenous cofactors for the improvement of bioremoval and biotransformation of sulfamethoxazole by Alcaligenes faecalis.

Authors:  Yi-Bi Zhang; Jiao Zhou; Qiu-Man Xu; Jing-Sheng Cheng; Yu-Lu Luo; Ying-Jin Yuan
Journal:  Sci Total Environ       Date:  2016-05-17       Impact factor: 7.963

9.  Characteristics and metabolic pathway of Alcaligenes sp. TB for simultaneous heterotrophic nitrification-aerobic denitrification.

Authors:  Jun Chen; Siyang Gu; Honghong Hao; Jianmeng Chen
Journal:  Appl Microbiol Biotechnol       Date:  2016-09-27       Impact factor: 4.813

10.  A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers.

Authors:  Michael A Quail; Miriam Smith; Paul Coupland; Thomas D Otto; Simon R Harris; Thomas R Connor; Anna Bertoni; Harold P Swerdlow; Yong Gu
Journal:  BMC Genomics       Date:  2012-07-24       Impact factor: 3.969
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  5 in total

1.  PicR as a MarR Family Transcriptional Repressor Multiply Controls the Transcription of Picolinic Acid Degradation Gene Cluster pic in Alcaligenes faecalis JQ135.

Authors:  Siqiong Xu; Xiao Wang; Fuyin Zhang; Yinhu Jiang; Yanting Zhang; Minggen Cheng; Xin Yan; Qing Hong; Jian He; Jiguo Qiu
Journal:  Appl Environ Microbiol       Date:  2022-05-23       Impact factor: 5.005

2.  Dirammox Is Widely Distributed and Dependently Evolved in Alcaligenes and Is Important to Nitrogen Cycle.

Authors:  Ting-Ting Hou; Li-Li Miao; Ji-Sen Peng; Lan Ma; Qiang Huang; Ying Liu; Meng-Ru Wu; Guo-Min Ai; Shuang-Jiang Liu; Zhi-Pei Liu
Journal:  Front Microbiol       Date:  2022-05-13       Impact factor: 6.064

3.  Genetic Foundations of Direct Ammonia Oxidation (Dirammox) to N2 and MocR-Like Transcriptional Regulator DnfR in Alcaligenes faecalis Strain JQ135.

Authors:  Si-Qiong Xu; Xin-Xin Qian; Yin-Hu Jiang; Ya-Ling Qin; Fu-Yin Zhang; Kai-Yun Zhang; Qing Hong; Jian He; Li-Li Miao; Zhi-Pei Liu; De-Feng Li; Shuang-Jiang Liu; Ji-Guo Qiu
Journal:  Appl Environ Microbiol       Date:  2022-02-02       Impact factor: 5.005

4.  Microbial Degradation of Nicotinamide by a Strain Alcaligenes sp. P156.

Authors:  Chunhui Hu; Shuxue Zhao; Kuiran Li; Hao Yu
Journal:  Sci Rep       Date:  2019-03-06       Impact factor: 4.379

5.  Genomic and resistome analysis of Alcaligenes faecalis strain PGB1 by Nanopore MinION and Illumina Technologies.

Authors:  Jidong Lang; Yanju Li; Wenjuan Yang; Ruyi Dong; Yuebin Liang; Jia Liu; Lanyou Chen; Weiwei Wang; Binbin Ji; Geng Tian; Nanying Che; Bo Meng
Journal:  BMC Genomics       Date:  2022-04-20       Impact factor: 4.547
  5 in total

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