Literature DB >> 29620135

How nature covers its bases.

Samuel Boldissar1, Mattanjah S de Vries.   

Abstract

The response of DNA and RNA bases to ultraviolet (UV) radiation has been receiving increasing attention for a number of important reasons: (i) the selection of the building blocks of life on an early earth may have been mediated by UV photochemistry, (ii) radiative damage of DNA depends critically on its photochemical properties, and (iii) the processes involved are quite general and play a role in more biomolecules as well as in other compounds. A growing number of groups worldwide have been studying the photochemistry of nucleobases and their derivatives. Here we focus on gas phase studies, which (i) reveal intrinsic properties distinct from effects from the molecular environment, (ii) allow for the most detailed comparison with the highest levels of computational theory, and (iii) provide isomeric selectivity. From the work so far a picture is emerging of rapid decay pathways following UV excitation. The main understanding, which is now well established, is that canonical nucleobases, when absorbing UV radiation, tend to eliminate the resulting electronic excitation by internal conversion (IC) to the electronic ground state in picoseconds or less. The availability of this rapid "safe" de-excitation pathway turns out to depend exquisitely on molecular structure. The canonical DNA and RNA bases are generally short-lived in the excited state, and thus UV protected. Many closely related compounds are longer lived, and thus more prone to other, potentially harmful, photochemical processes. It is this structure dependence that suggests a mechanism for the chemical selection of the building blocks of life on an early earth. However, the picture is far from complete and many new questions now arise.

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Year:  2018        PMID: 29620135     DOI: 10.1039/c8cp01236a

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  7 in total

1.  Photochemistry of 2-thiooxazole: a plausible prebiotic precursor to RNA nucleotides.

Authors:  Lauren Bertram; Samuel J Roberts; Matthew W Powner; Rafał Szabla
Journal:  Phys Chem Chem Phys       Date:  2022-09-14       Impact factor: 3.945

2.  Exploring the Influence of Intermolecular Interactions in Prebiotic Chemistry Using Laser Spectroscopy and Calculations.

Authors:  Ander Camiruaga; Imanol Usabiaga; Camilla Calabrese; Iker Lamas; Francisco J Basterretxea; José A Fernández
Journal:  Chemistry       Date:  2021-12-02       Impact factor: 5.020

3.  Effect of UV Radiation on Fluorescent RNA Aptamers' Functional and Templating Ability.

Authors:  Ranajay Saha; Irene A Chen
Journal:  Chembiochem       Date:  2019-08-21       Impact factor: 3.164

Review 4.  Gas-Phase Infrared Spectroscopy of Neutral Peptides: Insights from the Far-IR and THz Domain.

Authors:  Sjors Bakels; Marie-Pierre Gaigeot; Anouk M Rijs
Journal:  Chem Rev       Date:  2020-02-19       Impact factor: 60.622

5.  Electron-driven proton transfer relieves excited-state antiaromaticity in photoexcited DNA base pairs.

Authors:  Lucas J Karas; Chia-Hua Wu; Henrik Ottosson; Judy I Wu
Journal:  Chem Sci       Date:  2020-08-12       Impact factor: 9.825

Review 6.  Nucleic Acid Catalysis under Potential Prebiotic Conditions.

Authors:  Kristian Le Vay; Elia Salibi; Emilie Y Song; Hannes Mutschler
Journal:  Chem Asian J       Date:  2019-12-09

7.  Modelling Photoionisation in Isocytosine: Potential Formation of Longer-Lived Excited State Cations in its Keto Form.

Authors:  Javier Segarra-Martí; Michael J Bearpark
Journal:  Chemphyschem       Date:  2021-09-07       Impact factor: 3.102

  7 in total

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