Literature DB >> 29604129

Bicelle size modulates the rate of bacteriorhodopsin folding.

Timothy C Gruenhagen1, Joshua J Ziarek2, Jonathan P Schlebach1.   

Abstract

The conformational equilibria of integral membrane proteins have proven extremely difficult to characterize within native lipid bilayers. To circumvent technical issues, investigations of the structure and stability of α-helical membrane proteins are often carried out in mixed micelle or bicelle solvents that mimic the membrane and facilitate measurements of reversible folding. Under these conditions, the energetics of membrane protein folding are typically proportional to the mole fraction of an anionic detergent in the micelle. However, investigations of the folding and unfolding of bacteriorhodopsin (bR) surprisingly revealed that the folding rate is also highly sensitive to the bulk molar concentration of lipids and detergents. We show here that this rate enhancement coincides with changes in bicelle size and suggest this effect arises through restriction of the conformational search space during folding. In conjunction with previous mutagenic studies, these results provide additional evidence that a topological search limits the rate of bR folding. Furthermore, this finding provides insights into the manner by which micellar and bicellar environments influence the conformational stability of polytopic membrane proteins.
© 2018 The Protein Society.

Entities:  

Keywords:  bicelles; detergents; folding kinetics; membrane protein folding; micelles

Mesh:

Substances:

Year:  2018        PMID: 29604129      PMCID: PMC5980500          DOI: 10.1002/pro.3414

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  26 in total

1.  The contribution of a covalently bound cofactor to the folding and thermodynamic stability of an integral membrane protein.

Authors:  Paul Curnow; Paula J Booth
Journal:  J Mol Biol       Date:  2010-09-17       Impact factor: 5.469

2.  Combined kinetic and thermodynamic analysis of alpha-helical membrane protein unfolding.

Authors:  Paul Curnow; Paula J Booth
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-19       Impact factor: 11.205

3.  Thermodynamic stability of bacteriorhodopsin mutants measured relative to the bacterioopsin unfolded state.

Authors:  Zheng Cao; Jonathan P Schlebach; Chiwook Park; James U Bowie
Journal:  Biochim Biophys Acta       Date:  2011-08-22

4.  Secondary and tertiary structure of bacteriorhodopsin in the SDS denatured state.

Authors:  Venkatramanan Krishnamani; Balachandra G Hegde; Ralf Langen; Janos K Lanyi
Journal:  Biochemistry       Date:  2012-01-30       Impact factor: 3.162

5.  Reconstitution of integral membrane proteins into isotropic bicelles with improved sample stability and expanded lipid composition profile.

Authors:  Emma A Morrison; Katherine A Henzler-Wildman
Journal:  Biochim Biophys Acta       Date:  2011-12-29

Review 6.  Influences of membrane mimetic environments on membrane protein structures.

Authors:  Huan-Xiang Zhou; Timothy A Cross
Journal:  Annu Rev Biophys       Date:  2013-03-01       Impact factor: 12.981

7.  On choosing a detergent for solution NMR studies of membrane proteins.

Authors:  O Vinogradova; F Sönnichsen; C R Sanders
Journal:  J Biomol NMR       Date:  1998-05       Impact factor: 2.835

8.  Mixing and matching detergents for membrane protein NMR structure determination.

Authors:  Linda Columbus; Jan Lipfert; Kalyani Jambunathan; Daniel A Fox; Adelene Y L Sim; Sebastian Doniach; Scott A Lesley
Journal:  J Am Chem Soc       Date:  2009-06-03       Impact factor: 15.419

9.  Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins.

Authors:  Nathan Hyunjoong Joh; Andrew Min; Salem Faham; Julian P Whitelegge; Duan Yang; Virgil L Woods; James U Bowie
Journal:  Nature       Date:  2008-05-25       Impact factor: 49.962

10.  Bacteriorhodopsin folds through a poorly organized transition state.

Authors:  Jonathan P Schlebach; Nicholas B Woodall; James U Bowie; Chiwook Park
Journal:  J Am Chem Soc       Date:  2014-11-17       Impact factor: 15.419

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  1 in total

1.  Folding and Misfolding of Human Membrane Proteins in Health and Disease: From Single Molecules to Cellular Proteostasis.

Authors:  Justin T Marinko; Hui Huang; Wesley D Penn; John A Capra; Jonathan P Schlebach; Charles R Sanders
Journal:  Chem Rev       Date:  2019-01-04       Impact factor: 60.622

  1 in total

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