Literature DB >> 29602368

Open access genomic resources for terrestrial arthropods.

Vanessa L González1, Amanda M Devine2, Mike Trizna3, Daniel G Mulcahy2, Katharine B Barker2, Jonathan A Coddington2.   

Abstract

Genome sequencing initiatives like the Arthropod i5k project and other biodiversity genomics research rely on access to high quality DNA and/or tissue. Global collection initiatives such as the Smithsonian Global Genome Initiative (GGI) and its partner network, the Global Genome Biodiversity Network (GGBN) aim to provide access to these resources at high-quality standards. Here, we review progress toward providing genomic resources (tissues, DNA, genomes) for terrestrial arthropods, a megadiverse animal group, and compare progress in genome sequencing to all other animals.
Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Mesh:

Year:  2017        PMID: 29602368     DOI: 10.1016/j.cois.2017.12.003

Source DB:  PubMed          Journal:  Curr Opin Insect Sci            Impact factor:   5.186


  4 in total

1.  A reference library for Canadian invertebrates with 1.5 million barcodes, voucher specimens, and DNA samples.

Authors:  Jeremy R deWaard; Sujeevan Ratnasingham; Evgeny V Zakharov; Alex V Borisenko; Dirk Steinke; Angela C Telfer; Kate H J Perez; Jayme E Sones; Monica R Young; Valerie Levesque-Beaudin; Crystal N Sobel; Arusyak Abrahamyan; Kyrylo Bessonov; Gergin Blagoev; Stephanie L deWaard; Chris Ho; Natalia V Ivanova; Kara K S Layton; Liuqiong Lu; Ramya Manjunath; Jaclyn T A McKeown; Megan A Milton; Renee Miskie; Norm Monkhouse; Suresh Naik; Nadya Nikolova; Mikko Pentinsaari; Sean W J Prosser; Adriana E Radulovici; Claudia Steinke; Connor P Warne; Paul D N Hebert
Journal:  Sci Data       Date:  2019-12-06       Impact factor: 6.444

2.  Assessing species coverage and assembly quality of rapidly accumulating sequenced genomes.

Authors:  Romain Feron; Robert M Waterhouse
Journal:  Gigascience       Date:  2022-02-25       Impact factor: 6.524

3.  Comparative transcriptomics identifies candidate genes involved in the evolutionary transition from dehiscent to indehiscent fruits in Lepidium (Brassicaceae).

Authors:  Lydia Gramzow; Katharina Klupsch; Noé Fernández-Pozo; Martin Hölzer; Manja Marz; Stefan A Rensing; Günter Theißen
Journal:  BMC Plant Biol       Date:  2022-07-14       Impact factor: 5.260

4.  Genetic species identification of ecologically important planthoppers (Prokelisia spp.) of coastal Spartina saltmarshes using High Resolution Melting Analysis (HRMA).

Authors:  G Janelle Espinoza; Jaime R Alvarado Bremer
Journal:  Sci Rep       Date:  2019-12-27       Impact factor: 4.379

  4 in total

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