Literature DB >> 29602365

Beetle genomes in the 21st century: prospects, progress and priorities.

Duane D McKenna1.   

Abstract

The order Coleoptera (beetles) is arguably the most species-rich lineage of animals. Beetles exhibit an extraordinary variety of life histories and occupy most terrestrial environments. Whole genome sequences are available for 11 beetle species, only six of which have been published. Studies of beetle genomes have revealed remarkable new insights into the genomic basis and evolution of beetle life histories and other aspects of beetle biodiversity, including the genes underlying chemoperception, detoxification, and specialized plant feeding, as well as the role of horizontal gene transfer in elaboration of the beetle trophic repertoire. Nonetheless, such studies are in their infancy. The study of beetle genomes has the potential to further revolutionize our understanding of beetle biodiversity, but genomic studies of beetles remain seriously limited in scope and resolution by the very few genomes that are currently available for study.
Copyright © 2018 Elsevier Inc. All rights reserved.

Mesh:

Year:  2017        PMID: 29602365     DOI: 10.1016/j.cois.2017.12.002

Source DB:  PubMed          Journal:  Curr Opin Insect Sci            Impact factor:   5.186


  11 in total

1.  Reference-Guided De Novo Genome Assembly of the Flour Beetle Tribolium freemani.

Authors:  Marin Volarić; Evelin Despot-Slade; Damira Veseljak; Nevenka Meštrović; Brankica Mravinac
Journal:  Int J Mol Sci       Date:  2022-05-24       Impact factor: 6.208

2.  A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability.

Authors:  Qingyun Wang; Liwei Liu; Sujiong Zhang; Hong Wu; Junhao Huang
Journal:  Gigascience       Date:  2022-06-28       Impact factor: 7.658

3.  Illumina Short-Read Sequencing of the Mitogenomes of Novel Scarites subterraneus Isolates Allows for Taxonomic Refinement of the Genus Scarites Fabricius 1775, within the Carabidae Family.

Authors:  Elliot C Kyndt; John A Kyndt
Journal:  Insects       Date:  2022-02-11       Impact factor: 2.769

4.  Haplotype-resolved genome assembly enables gene discovery in the red palm weevil Rhynchophorus ferrugineus.

Authors:  Guilherme B Dias; Musaad A Altammami; Hamadttu A F El-Shafie; Fahad M Alhoshani; Mohamed B Al-Fageeh; Casey M Bergman; Manee M Manee
Journal:  Sci Rep       Date:  2021-05-11       Impact factor: 4.379

5.  Double-stranded RNA binding protein, Staufen, is required for the initiation of RNAi in coleopteran insects.

Authors:  June-Sun Yoon; Kanakachari Mogilicherla; Dhandapani Gurusamy; Xien Chen; Shankar C R R Chereddy; Subba Reddy Palli
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-30       Impact factor: 11.205

6.  Genome of the small hive beetle (Aethina tumida, Coleoptera: Nitidulidae), a worldwide parasite of social bee colonies, provides insights into detoxification and herbivory.

Authors:  Jay D Evans; Duane McKenna; Erin Scully; Steven C Cook; Benjamin Dainat; Noble Egekwu; Nathaniel Grubbs; Dawn Lopez; Marcé D Lorenzen; Steven M Reyna; Frank D Rinkevich; Peter Neumann; Qiang Huang
Journal:  Gigascience       Date:  2018-12-01       Impact factor: 6.524

7.  The draft genome of the specialist flea beetle Altica viridicyanea (Coleoptera: Chrysomelidae).

Authors:  Huai-Jun Xue; Yi-Wei Niu; Kari A Segraves; Rui-E Nie; Ya-Jing Hao; Li-Li Zhang; Xin-Chao Cheng; Xue-Wen Zhang; Wen-Zhu Li; Run-Sheng Chen; Xing-Ke Yang
Journal:  BMC Genomics       Date:  2021-04-07       Impact factor: 3.969

8.  Draft genome of a biparental beetle species, Lethrus apterus.

Authors:  Nikoletta A Nagy; Rita Rácz; Oliver Rimington; Szilárd Póliska; Pablo Orozco-terWengel; Michael W Bruford; Zoltán Barta
Journal:  BMC Genomics       Date:  2021-04-26       Impact factor: 3.969

9.  Genome assemblies of three closely related leaf beetle species (Galerucella spp.).

Authors:  Xuyue Yang; Tanja Slotte; Jacques Dainat; Peter A Hambäck
Journal:  G3 (Bethesda)       Date:  2021-08-07       Impact factor: 3.154

10.  The evolution and genomic basis of beetle diversity.

Authors:  Duane D McKenna; Seunggwan Shin; Dirk Ahrens; Michael Balke; Cristian Beza-Beza; Dave J Clarke; Alexander Donath; Hermes E Escalona; Frank Friedrich; Harald Letsch; Shanlin Liu; David Maddison; Christoph Mayer; Bernhard Misof; Peyton J Murin; Oliver Niehuis; Ralph S Peters; Lars Podsiadlowski; Hans Pohl; Erin D Scully; Evgeny V Yan; Xin Zhou; Adam Ślipiński; Rolf G Beutel
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-18       Impact factor: 11.205

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