Literature DB >> 29602364

Genomes of the Hymenoptera.

Michael G Branstetter1, Anna K Childers2, Diana Cox-Foster1, Keith R Hopper3, Karen M Kapheim4, Amy L Toth5, Kim C Worley6.   

Abstract

Hymenoptera is the second-most sequenced arthropod order, with 52 publically archived genomes (71 with ants, reviewed elsewhere), however these genomes do not capture the breadth of this very diverse order (Figure 1, Table 1). These sequenced genomes represent only 15 of the 97 extant families. Although at least 55 other genomes are in progress in an additional 11 families (see Table 2), stinging wasps represent 35 (67%) of the available and 42 (76%) of the in progress genomes. A more comprehensive catalog of hymenopteran genomes is needed for research into the evolutionary processes underlying the expansive diversity in terms of ecology, behavior, and physiological traits within this group. Additional sequencing is needed to generate an assembly for even 0.05% of the estimated 1 million hymenopteran species, and we recommend premier level assemblies for at least 0.1% of the >150,000 named species dispersed across the order. Given the haplodiploid sex determination in Hymenoptera, haploid male sequencing will help minimize genome assembly issues to enable higher quality genome assemblies.
Copyright © 2017 Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 29602364      PMCID: PMC5993429          DOI: 10.1016/j.cois.2017.11.008

Source DB:  PubMed          Journal:  Curr Opin Insect Sci            Impact factor:   5.186


  92 in total

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Authors:  Dolph Schluter
Journal:  Science       Date:  2009-02-06       Impact factor: 47.728

2.  The Nasonia genome sequence: finding gems in the jewel (wasp) box.

Authors:  Sue Brown
Journal:  Insect Mol Biol       Date:  2010-02       Impact factor: 3.585

3.  Phenotypically plastic traits regulate caste formation and soldier function in polyembryonic wasps.

Authors:  M S Smith; I Milton; M R Strand
Journal:  J Evol Biol       Date:  2010-10-07       Impact factor: 2.411

4.  An expansion of the genome size dataset for the insect order Hymenoptera, with a first test of parasitism and eusociality as possible constraints.

Authors:  A M Ardila-Garcia; G J Umphrey; T R Gregory
Journal:  Insect Mol Biol       Date:  2010-02-26       Impact factor: 3.585

Review 5.  Complex cocktails: the evolutionary novelty of venoms.

Authors:  Nicholas R Casewell; Wolfgang Wüster; Freek J Vonk; Robert A Harrison; Bryan G Fry
Journal:  Trends Ecol Evol       Date:  2012-12-05       Impact factor: 17.712

Review 6.  Behavioural syndromes and social insects: personality at multiple levels.

Authors:  Jennifer M Jandt; Sarah Bengston; Noa Pinter-Wollman; Jonathan N Pruitt; Nigel E Raine; Anna Dornhaus; Andrew Sih
Journal:  Biol Rev Camb Philos Soc       Date:  2013-05-15

7.  Recombination is associated with the evolution of genome structure and worker behavior in honey bees.

Authors:  Clement F Kent; Shermineh Minaei; Brock A Harpur; Amro Zayed
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-15       Impact factor: 11.205

8.  Obligate mutualism within a host drives the extreme specialization of a fig wasp genome.

Authors:  Jin-Hua Xiao; Zhen Yue; Ling-Yi Jia; Xin-Hua Yang; Li-Hua Niu; Zhuo Wang; Peng Zhang; Bao-Fa Sun; Shun-Min He; Zi Li; Tuan-Lin Xiong; Wen Xin; Hai-Feng Gu; Bo Wang; John H Werren; Robert W Murphy; David Wheeler; Li-Ming Niu; Guang-Chang Ma; Ting Tang; Sheng-Nan Bian; Ning-Xin Wang; Chun-Yan Yang; Nan Wang; Yue-Guan Fu; Wen-Zhu Li; Soojin V Yi; Xing-Yu Yang; Qing Zhou; Chang-Xin Lu; Chun-Yan Xu; Li-Juan He; Li-Li Yu; Ming Chen; Yuan Zheng; Shao-Wei Wang; Shuang Zhao; Yan-Hong Li; Yang-Yang Yu; Xiao-Ju Qian; Yue Cai; Lian-Le Bian; Shu Zhang; Jun-Yi Wang; Ye Yin; Hui Xiao; Guan-Hong Wang; Hui Yu; Wen-Shan Wu; James M Cook; Jun Wang; Da-Wei Huang
Journal:  Genome Biol       Date:  2013-12-20       Impact factor: 13.583

9.  The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes.

Authors:  Sarah D Kocher; Cai Li; Wei Yang; Hao Tan; Soojin V Yi; Xingyu Yang; Hopi E Hoekstra; Guojie Zhang; Naomi E Pierce; Douglas W Yu
Journal:  Genome Biol       Date:  2013-12-20       Impact factor: 13.583

10.  Widespread genome reorganization of an obligate virus mutualist.

Authors:  Gaelen R Burke; Kimberly K O Walden; James B Whitfield; Hugh M Robertson; Michael R Strand
Journal:  PLoS Genet       Date:  2014-09-18       Impact factor: 5.917

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  20 in total

1.  Genomes of the willow-galling sawflies Euura lappo and Eupontania aestiva (Hymenoptera: Tenthredinidae): a resource for research on ecological speciation, adaptation, and gall induction.

Authors:  Craig Michell; Saskia Wutke; Manuel Aranda; Tommi Nyman
Journal:  G3 (Bethesda)       Date:  2021-05-07       Impact factor: 3.154

2.  A comparative genomic approach using mouse and fruit fly data to discover genes involved in testis function in hymenopterans with a focus on Nasonia vitripennis.

Authors:  Charlotte Lécureuil; Sophie Fouchécourt; Rémi Eliautout; Vanessa Guérin; Kevin Hidalgo; Dorian Neutre; Géraldine Roux; Philippe Monget
Journal:  BMC Ecol Evol       Date:  2021-05-19

3.  The First Draft Genome of the Plasterer Bee Colletes gigas (Hymenoptera: Colletidae: Colletes).

Authors:  Qing-Song Zhou; Arong Luo; Feng Zhang; Ze-Qing Niu; Qing-Tao Wu; Mei Xiong; Michael C Orr; Chao-Dong Zhu
Journal:  Genome Biol Evol       Date:  2020-06-01       Impact factor: 3.416

4.  Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera.

Authors:  Jan Philip Oeyen; Patrice Baa-Puyoulet; Joshua B Benoit; Leo W Beukeboom; Erich Bornberg-Bauer; Anja Buttstedt; Federica Calevro; Elizabeth I Cash; Hsu Chao; Hubert Charles; Mei-Ju May Chen; Christopher Childers; Andrew G Cridge; Peter Dearden; Huyen Dinh; Harsha Vardhan Doddapaneni; Amanda Dolan; Alexander Donath; Daniel Dowling; Shannon Dugan; Elizabeth Duncan; Elena N Elpidina; Markus Friedrich; Elzemiek Geuverink; Joshua D Gibson; Sonja Grath; Cornelis J P Grimmelikhuijzen; Ewald Große-Wilde; Cameron Gudobba; Yi Han; Bill S Hansson; Frank Hauser; Daniel S T Hughes; Panagiotis Ioannidis; Emmanuelle Jacquin-Joly; Emily C Jennings; Jeffery W Jones; Steffen Klasberg; Sandra L Lee; Peter Lesný; Mackenzie Lovegrove; Sebastian Martin; Alexander G Martynov; Christoph Mayer; Nicolas Montagné; Victoria C Moris; Monica Munoz-Torres; Shwetha Canchi Murali; Donna M Muzny; Brenda Oppert; Nicolas Parisot; Thomas Pauli; Ralph S Peters; Malte Petersen; Christian Pick; Emma Persyn; Lars Podsiadlowski; Monica F Poelchau; Panagiotis Provataris; Jiaxin Qu; Maarten J M F Reijnders; Björn Marcus von Reumont; Andrew J Rosendale; Felipe A Simao; John Skelly; Alexandros G Sotiropoulos; Aaron L Stahl; Megumi Sumitani; Elise M Szuter; Olivia Tidswell; Evangelos Tsitlakidis; Lucia Vedder; Robert M Waterhouse; John H Werren; Jeanne Wilbrandt; Kim C Worley; Daisuke S Yamamoto; Louis van de Zande; Evgeny M Zdobnov; Tanja Ziesmann; Richard A Gibbs; Stephen Richards; Masatsugu Hatakeyama; Bernhard Misof; Oliver Niehuis
Journal:  Genome Biol Evol       Date:  2020-07-01       Impact factor: 3.416

5.  Genome of the Parasitoid Wasp Diachasma alloeum, an Emerging Model for Ecological Speciation and Transitions to Asexual Reproduction.

Authors:  Eric S Tvedte; Kimberly K O Walden; Kyle E McElroy; John H Werren; Andrew A Forbes; Glen R Hood; John M Logsdon; Jeffrey L Feder; Hugh M Robertson
Journal:  Genome Biol Evol       Date:  2019-10-01       Impact factor: 3.416

6.  Sex biased expression and co-expression networks in development, using the hymenopteran Nasonia vitripennis.

Authors:  Alfredo Rago; John H Werren; John K Colbourne
Journal:  PLoS Genet       Date:  2020-01-27       Impact factor: 5.917

7.  Genome of the pincer wasp Gonatopus flavifemur reveals unique venom evolution and a dual adaptation to parasitism and predation.

Authors:  Yi Yang; Xinhai Ye; Cong Dang; Yunshen Cao; Rui Hong; Yu H Sun; Shan Xiao; Yang Mei; Le Xu; Qi Fang; Huamei Xiao; Fei Li; Gongyin Ye
Journal:  BMC Biol       Date:  2021-07-27       Impact factor: 7.431

8.  Genome Sequence of the Wheat Stem Sawfly, Cephus cinctus, Representing an Early-Branching Lineage of the Hymenoptera, Illuminates Evolution of Hymenopteran Chemoreceptors.

Authors:  Hugh M Robertson; Robert M Waterhouse; Kimberly K O Walden; Livio Ruzzante; Maarten J M F Reijnders; Brad S Coates; Fabrice Legeai; Joanna C Gress; Sezgi Biyiklioglu; David K Weaver; Kevin W Wanner; Hikmet Budak
Journal:  Genome Biol Evol       Date:  2018-11-01       Impact factor: 3.416

9.  Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: Nomia melanderi).

Authors:  Karen M Kapheim; Hailin Pan; Cai Li; Charles Blatti; Brock A Harpur; Panagiotis Ioannidis; Beryl M Jones; Clement F Kent; Livio Ruzzante; Laura Sloofman; Eckart Stolle; Robert M Waterhouse; Amro Zayed; Guojie Zhang; William T Wcislo
Journal:  G3 (Bethesda)       Date:  2019-03-07       Impact factor: 3.154

10.  Genomic Resources for Goniozus legneri, Aleochara bilineata and Paykullia maculata, Representing Three Independent Origins of the Parasitoid Lifestyle in Insects.

Authors:  Ken Kraaijeveld; Peter Neleman; Janine Mariën; Emile de Meijer; Jacintha Ellers
Journal:  G3 (Bethesda)       Date:  2019-04-09       Impact factor: 3.154

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