Literature DB >> 29601856

Light-optimized growth of cyanobacterial cultures: Growth phases and productivity of biomass and secreted molecules in light-limited batch growth.

Ryan L Clark1, Laura L McGinley2, Hugh M Purdy3, Travis C Korosh4, Jennifer L Reed5, Thatcher W Root6, Brian F Pfleger7.   

Abstract

Cyanobacteria are photosynthetic microorganisms whose metabolism canpan> be modified through genetic enginpan>eerinpan>g for production of a wide variety of mopan> class="Chemical">lecules directly from CO2, light, and nutrients. Diverse molecules have been produced in small quantities by engineered cyanobacteria to demonstrate the feasibility of photosynthetic biorefineries. Consequently, there is interest in engineering these microorganisms to increase titer and productivity to meet industrial metrics. Unfortunately, differing experimental conditions and cultivation techniques confound comparisons of strains and metabolic engineering strategies. In this work, we discuss the factors governing photoautotrophic growth and demonstrate nutritionally replete conditions in which a model cyanobacterium can be grown to stationary phase with light as the sole limiting substrate. We introduce a mathematical framework for understanding the dynamics of growth and product secretion in light-limited cyanobacterial cultures. Using this framework, we demonstrate how cyanobacterial growth in differing experimental systems can be easily scaled by the volumetric photon delivery rate using the model organisms Synechococcus sp. strain PCC7002 and Synechococcus elongatus strain UTEX2973. We use this framework to predict scaled up growth and product secretion in 1L photobioreactors of two strains of Synechococcus PCC7002 engineered for production of l-lactate or L-lysine. The analytical framework developed in this work serves as a guide for future metabolic engineering studies of cyanobacteria to allow better comparison of experiments performed in different experimental systems and to further investigate the dynamics of growth and product secretion.
Copyright © 2018 International Metabolic Engineering Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Cyanobacteria; Light-limitation; Photobioreactor; Photosynthetic efficiency; Scale-up

Mesh:

Substances:

Year:  2018        PMID: 29601856      PMCID: PMC5984190          DOI: 10.1016/j.ymben.2018.03.017

Source DB:  PubMed          Journal:  Metab Eng        ISSN: 1096-7176            Impact factor:   9.783


  36 in total

1.  Rerouting carbon flux to enhance photosynthetic productivity.

Authors:  Daniel C Ducat; J Abraham Avelar-Rivas; Jeffrey C Way; Pamela A Silver
Journal:  Appl Environ Microbiol       Date:  2012-02-03       Impact factor: 4.792

2.  Dynamics of Photosynthesis in a Glycogen-Deficient glgC Mutant of Synechococcus sp. Strain PCC 7002.

Authors:  Simon A Jackson; Julian J Eaton-Rye; Donald A Bryant; Matthew C Posewitz; Fiona K Davies
Journal:  Appl Environ Microbiol       Date:  2015-07-06       Impact factor: 4.792

Review 3.  Metabolic design for cyanobacterial chemical synthesis.

Authors:  John W K Oliver; Shota Atsumi
Journal:  Photosynth Res       Date:  2014-04-10       Impact factor: 3.573

4.  CRISPR interference as a titratable, trans-acting regulatory tool for metabolic engineering in the cyanobacterium Synechococcus sp. strain PCC 7002.

Authors:  Gina C Gordon; Travis C Korosh; Jeffrey C Cameron; Andrew L Markley; Matthew B Begemann; Brian F Pfleger
Journal:  Metab Eng       Date:  2016-07-29       Impact factor: 9.783

Review 5.  Isolation and purification of cyanobacteria.

Authors:  R Rippka
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

Review 6.  Improving polyglucan production in cyanobacteria and microalgae via cultivation design and metabolic engineering.

Authors:  Shimpei Aikawa; Shih-Hsin Ho; Akihito Nakanishi; Jo-Shu Chang; Tomohisa Hasunuma; Akihiko Kondo
Journal:  Biotechnol J       Date:  2015-04-13       Impact factor: 4.677

7.  A bioenergetic assessment of photosynthetic growth of Synechocystis sp. PCC 6803 in continuous cultures.

Authors:  Eleftherios Touloupakis; Bernardo Cicchi; Giuseppe Torzillo
Journal:  Biotechnol Biofuels       Date:  2015-09-04       Impact factor: 6.040

8.  Microbial growth and physiology: a call for better craftsmanship.

Authors:  Thomas Egli
Journal:  Front Microbiol       Date:  2015-04-14       Impact factor: 5.640

9.  Synechocystis PCC 6803 overexpressing RuBisCO grow faster with increased photosynthesis.

Authors:  Feiyan Liang; Peter Lindblad
Journal:  Metab Eng Commun       Date:  2017-02-20

10.  Engineering photosynthetic production of L-lysine.

Authors:  Travis C Korosh; Andrew L Markley; Ryan L Clark; Laura L McGinley; Katherine D McMahon; Brian F Pfleger
Journal:  Metab Eng       Date:  2017-10-28       Impact factor: 9.783

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  13 in total

1.  Mechanical regulation of photosynthesis in cyanobacteria.

Authors:  Kristin A Moore; Sabina Altus; Jian W Tay; Janet B Meehl; Evan B Johnson; David M Bortz; Jeffrey C Cameron
Journal:  Nat Microbiol       Date:  2020-03-23       Impact factor: 17.745

2.  Introduction of NADH-dependent nitrate assimilation in Synechococcus sp. PCC 7002 improves photosynthetic production of 2-methyl-1-butanol and isobutanol.

Authors:  Hugh M Purdy; Brian F Pfleger; Jennifer L Reed
Journal:  Metab Eng       Date:  2021-11-10       Impact factor: 8.829

3.  Newly discovered Synechococcus sp. PCC 11901 is a robust cyanobacterial strain for high biomass production.

Authors:  Artur Włodarczyk; Tiago Toscano Selão; Birgitta Norling; Peter J Nixon
Journal:  Commun Biol       Date:  2020-05-07

4.  Optimal proteome allocation strategies for phototrophic growth in a light-limited chemostat.

Authors:  Marjan Faizi; Ralf Steuer
Journal:  Microb Cell Fact       Date:  2019-10-10       Impact factor: 5.328

5.  Development of a longevous two-species biophotovoltaics with constrained electron flow.

Authors:  Huawei Zhu; Hengkai Meng; Wei Zhang; Haichun Gao; Jie Zhou; Yanping Zhang; Yin Li
Journal:  Nat Commun       Date:  2019-09-19       Impact factor: 14.919

6.  A Hybrid Flux Balance Analysis and Machine Learning Pipeline Elucidates Metabolic Adaptation in Cyanobacteria.

Authors:  Supreeta Vijayakumar; Pattanathu K S M Rahman; Claudio Angione
Journal:  iScience       Date:  2020-11-18

7.  Machine learning-informed and synthetic biology-enabled semi-continuous algal cultivation to unleash renewable fuel productivity.

Authors:  Bin Long; Bart Fischer; Yining Zeng; Zoe Amerigian; Qiang Li; Henry Bryant; Man Li; Susie Y Dai; Joshua S Yuan
Journal:  Nat Commun       Date:  2022-01-27       Impact factor: 17.694

8.  Metabolic engineering of a fast-growing cyanobacterium Synechococcus elongatus PCC 11801 for photoautotrophic production of succinic acid.

Authors:  Shinjinee Sengupta; Damini Jaiswal; Annesha Sengupta; Shikha Shah; Shruti Gadagkar; Pramod P Wangikar
Journal:  Biotechnol Biofuels       Date:  2020-05-18       Impact factor: 6.040

9.  Pooled CRISPRi screening of the cyanobacterium Synechocystis sp PCC 6803 for enhanced industrial phenotypes.

Authors:  Lun Yao; Kiyan Shabestary; Sara M Björk; Johannes Asplund-Samuelsson; Haakan N Joensson; Michael Jahn; Elton P Hudson
Journal:  Nat Commun       Date:  2020-04-03       Impact factor: 14.919

10.  Improving heterologous protein expression in Synechocystis sp. PCC 6803 for alpha-bisabolene production.

Authors:  Jacob Sebesta; Christie Am Peebles
Journal:  Metab Eng Commun       Date:  2019-12-09
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