Literature DB >> 29593328

Deconstructing the pluripotency gene regulatory network.

Mo Li1, Juan Carlos Izpisua Belmonte2.   

Abstract

Pluripotent stem cells can be isolated from embryos or derived by reprogramming. Pluripotency is stabilized by an interconnected network of pluripotency genes that cooperatively regulate gene expression. Here we describe the molecular principles of pluripotency gene function and highlight post-transcriptional controls, particularly those induced by RNA-binding proteins and alternative splicing, as an important regulatory layer of pluripotency. We also discuss heterogeneity in pluripotency regulation, alternative pluripotency states and future directions of pluripotent stem cell research.

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Year:  2018        PMID: 29593328      PMCID: PMC6620196          DOI: 10.1038/s41556-018-0067-6

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  25 in total

1.  The RNA exosome contributes to gene expression regulation during stem cell differentiation.

Authors:  Marta Lloret-Llinares; Evdoxia Karadoulama; Yun Chen; Luke A Wojenski; Geno J Villafano; Jette Bornholdt; Robin Andersson; Leighton Core; Albin Sandelin; Torben Heick Jensen
Journal:  Nucleic Acids Res       Date:  2018-11-30       Impact factor: 16.971

2.  Myc and Dnmt1 impede the pluripotent to totipotent state transition in embryonic stem cells.

Authors:  Xudong Fu; Xiaoji Wu; Mohamed Nadhir Djekidel; Yi Zhang
Journal:  Nat Cell Biol       Date:  2019-06-17       Impact factor: 28.824

3.  PRDM1 controls the sequential activation of neural, neural crest and sensory progenitor determinants.

Authors:  Ravindra S Prajapati; Mark Hintze; Andrea Streit
Journal:  Development       Date:  2019-12-16       Impact factor: 6.868

4.  Protein-protein interaction network of E. coli K-12 has significant high-dimensional cavities: new insights from algebraic topological studies.

Authors:  Xiao-Yan Xue; Zhou Chen; Yue Hu; Dan Nie; Hui Zhao; Xing-Gang Mao
Journal:  FEBS Open Bio       Date:  2022-06-16       Impact factor: 2.792

5.  hnRNPLL controls pluripotency exit of embryonic stem cells by modulating alternative splicing of Tbx3 and Bptf.

Authors:  Xue Wang; Changyun Ping; Puwen Tan; Chenguang Sun; Guang Liu; Tao Liu; Shuchun Yang; Yanmin Si; Lijun Zhao; Yongfei Hu; Yuyan Jia; Xiaoshuang Wang; Meili Zhang; Fang Wang; Dong Wang; Jia Yu; Yanni Ma; Yue Huang
Journal:  EMBO J       Date:  2020-12-22       Impact factor: 14.012

6.  A transcriptional roadmap for 2C-like-to-pluripotent state transition.

Authors:  Xudong Fu; Mohamed Nadhir Djekidel; Yi Zhang
Journal:  Sci Adv       Date:  2020-05-29       Impact factor: 14.136

Review 7.  Low complexity domains, condensates, and stem cell pluripotency.

Authors:  Munender Vodnala; Eun-Bee Choi; Yick W Fong
Journal:  World J Stem Cells       Date:  2021-05-26       Impact factor: 5.326

Review 8.  The recent advances in the mathematical modelling of human pluripotent stem cells.

Authors:  L E Wadkin; S Orozco-Fuentes; I Neganova; M Lako; A Shukurov; N G Parker
Journal:  SN Appl Sci       Date:  2020-01-27

Review 9.  Regulatory network characterization in development: challenges and opportunities.

Authors:  Guangdun Peng; Jing-Dong J Han
Journal:  F1000Res       Date:  2018-09-17

10.  A mathematical modelling framework for the regulation of intra-cellular OCT4 in human pluripotent stem cells.

Authors:  L E Wadkin; S Orozco-Fuentes; I Neganova; M Lako; N G Parker; A Shukurov
Journal:  PLoS One       Date:  2021-08-04       Impact factor: 3.240

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