Literature DB >> 29589152

Genetic test utilization and diagnostic yield in adult patients with neurological disorders.

Tanya M Bardakjian1, Ingo Helbig1,2, Colin Quinn1, Lauren B Elman1, Leo F McCluskey1, Steven S Scherer1, Pedro Gonzalez-Alegre3,4.   

Abstract

To determine the diagnostic yield of different genetic test modalities in adult patients with neurological disorders, we evaluated all adult patients seen for genetic diagnostic evaluation in the outpatient neurology practice at the University of Pennsylvania between January 2016 and April 2017 as part of the newly created Penn Neurogenetics Program. Subjects were identified through our electronic medical system as those evaluated by the Program's single clinical genetic counselor in that period. A total of 377 patients were evaluated by the Penn Neurogenetics Program in different settings and genetic testing recommended. Of those, 182 (48%) were seen in subspecialty clinic setting and 195 (52%) in a General Neurogenetics Clinic. Genetic testing was completed in over 80% of patients in whom it was recommended. The diagnostic yield was 32% across disease groups. Stratified by testing modality, the yield was highest with directed testing (50%) and array comparative genomic hybridization (45%), followed by gene panels and exome testing (25% each). In conclusion, genetic testing can be successfully requested in clinic in a large majority of adult patients. Age is not a limiting factor for a genetic diagnostic evaluation and the yield of clinical testing across phenotypes (almost 30%) is consistent with previous phenotype-focused or research-based studies. These results should inform the development of specific guidelines for clinical testing and serve as evidence to improve reimbursement by insurance payers.

Entities:  

Keywords:  Diagnostic yield; Neurology; Next-generation sequencing; Whole exome sequencing

Mesh:

Year:  2018        PMID: 29589152     DOI: 10.1007/s10048-018-0544-x

Source DB:  PubMed          Journal:  Neurogenetics        ISSN: 1364-6745            Impact factor:   2.660


  14 in total

Review 1.  The Cost-effectiveness of Genetic Screening for Familial Hypercholesterolemia: a Systematic Review.

Authors:  A Rosso; E Pitini; E D'Andrea; A Massimi; C De Vito; C Marzuillo; P Villari
Journal:  Ann Ig       Date:  2017 Sep-Oct

2.  Target-enrichment sequencing and copy number evaluation in inherited polyneuropathy.

Authors:  Wei Wang; Chen Wang; D Brian Dawson; Erik C Thorland; Patrick A Lundquist; Bruce W Eckloff; Yanhong Wu; Saurabh Baheti; Jared M Evans; Steven S Scherer; Peter J Dyck; Christopher J Klein
Journal:  Neurology       Date:  2016-04-13       Impact factor: 9.910

3.  A post hoc study on gene panel analysis for the diagnosis of dystonia.

Authors:  Martje E van Egmond; Coen H A Lugtenberg; Oebele F Brouwer; Maria Fiorella Contarino; Victor S C Fung; M Rebecca Heiner-Fokkema; Jacobus J van Hilten; Annemarie H van der Hout; Kathryn J Peall; Richard J Sinke; Emmanuel Roze; Corien C Verschuuren-Bemelmans; Michel A Willemsen; Nicole I Wolf; Marina A Tijssen; Tom J de Koning
Journal:  Mov Disord       Date:  2017-02-10       Impact factor: 10.338

4.  Diagnostic algorithms in Charcot-Marie-Tooth neuropathies: experiences from a German genetic laboratory on the basis of 1206 index patients.

Authors:  S Rudnik-Schöneborn; D Tölle; J Senderek; K Eggermann; M Elbracht; U Kornak; M von der Hagen; J Kirschner; B Leube; W Müller-Felber; U Schara; K von Au; D Wieczorek; C Bußmann; K Zerres
Journal:  Clin Genet       Date:  2015-04-29       Impact factor: 4.438

5.  "Matching" consent to purpose: The example of the Matchmaker Exchange.

Authors:  Stephanie O M Dyke; Bartha M Knoppers; Ada Hamosh; Helen V Firth; Matthew Hurles; Michael Brudno; Kym M Boycott; Anthony A Philippakis; Heidi L Rehm
Journal:  Hum Mutat       Date:  2017-07-12       Impact factor: 4.878

6.  Exome sequencing in the clinical diagnosis of sporadic or familial cerebellar ataxia.

Authors:  Brent L Fogel; Hane Lee; Joshua L Deignan; Samuel P Strom; Sibel Kantarci; Xizhe Wang; Fabiola Quintero-Rivera; Eric Vilain; Wayne W Grody; Susan Perlman; Daniel H Geschwind; Stanley F Nelson
Journal:  JAMA Neurol       Date:  2014-10       Impact factor: 18.302

7.  Barriers to Genetic Testing for Pediatric Medicaid Beneficiaries With Epilepsy.

Authors:  Eric J Kutscher; Sucheta M Joshi; Anup D Patel; Baria Hafeez; Zachary M Grinspan
Journal:  Pediatr Neurol       Date:  2017-04-20       Impact factor: 3.372

8.  Clinical exome sequencing in early-onset generalized dystonia and large-scale resequencing follow-up.

Authors:  Michael Zech; Sylvia Boesch; Angela Jochim; Sandrina Weber; Tobias Meindl; Barbara Schormair; Thomas Wieland; Christian Lunetta; Valeria Sansone; Michael Messner; Joerg Mueller; Andres Ceballos-Baumann; Tim M Strom; Roberto Colombo; Werner Poewe; Bernhard Haslinger; Juliane Winkelmann
Journal:  Mov Disord       Date:  2016-09-26       Impact factor: 10.338

9.  Outcome of Whole Exome Sequencing for Diagnostic Odyssey Cases of an Individualized Medicine Clinic: The Mayo Clinic Experience.

Authors:  Konstantinos N Lazaridis; Kimberly A Schahl; Margot A Cousin; Dusica Babovic-Vuksanovic; Douglas L Riegert-Johnson; Ralitza H Gavrilova; Tammy M McAllister; Noralane M Lindor; Roshini S Abraham; Michael J Ackerman; Pavel N Pichurin; David R Deyle; Dimitar K Gavrilov; Jennifer L Hand; Eric W Klee; Michael C Stephens; Myra J Wick; Elizabeth J Atkinson; David R Linden; Matthew J Ferber; Eric D Wieben; Gianrico Farrugia
Journal:  Mayo Clin Proc       Date:  2016-03       Impact factor: 7.616

10.  Clinical Impact and Cost-Effectiveness of Whole Exome Sequencing as a Diagnostic Tool: A Pediatric Center's Experience.

Authors:  C Alexander Valencia; Ammar Husami; Jennifer Holle; Judith A Johnson; Yaping Qian; Abhinav Mathur; Chao Wei; Subba Rao Indugula; Fanggeng Zou; Haiying Meng; Lijun Wang; Xia Li; Rachel Fisher; Tony Tan; Amber Hogart Begtrup; Kathleen Collins; Katie A Wusik; Derek Neilson; Thomas Burrow; Elizabeth Schorry; Robert Hopkin; Mehdi Keddache; John Barker Harley; Kenneth M Kaufman; Kejian Zhang
Journal:  Front Pediatr       Date:  2015-08-03       Impact factor: 3.418

View more
  9 in total

Review 1.  Precision medicine for genetic epilepsy on the horizon: Recent advances, present challenges, and suggestions for continued progress.

Authors:  Juliet K Knowles; Ingo Helbig; Cameron S Metcalf; Laura S Lubbers; Lori L Isom; Scott Demarest; Ethan M Goldberg; Alfred L George; Holger Lerche; Sarah Weckhuysen; Vicky Whittemore; Samuel F Berkovic; Daniel H Lowenstein
Journal:  Epilepsia       Date:  2022-07-17       Impact factor: 6.740

2.  Genetic skin disorders: The value of a multidisciplinary clinic.

Authors:  James Clayton Parker; Sneha Rangu; Katheryn Lynn Grand; Elizabeth Joyce Bhoj; Leslie Castelo-Soccio; Sarah E Sheppard
Journal:  Am J Med Genet A       Date:  2021-01-27       Impact factor: 2.802

3.  Precision medicine integrating whole-genome sequencing, comprehensive metabolomics, and advanced imaging.

Authors:  Ying-Chen Claire Hou; Hung-Chun Yu; Rick Martin; Elizabeth T Cirulli; Natalie M Schenker-Ahmed; Michael Hicks; Isaac V Cohen; Thomas J Jönsson; Robyn Heister; Lori Napier; Christine Leon Swisher; Saints Dominguez; Haibao Tang; Weizhong Li; Bradley A Perkins; Jaime Barea; Christina Rybak; Emily Smith; Keegan Duchicela; Michael Doney; Pamila Brar; Nathaniel Hernandez; Ewen F Kirkness; Andrew M Kahn; J Craig Venter; David S Karow; C Thomas Caskey
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-24       Impact factor: 11.205

4.  No-boundary thinking: a viable solution to ethical data-driven AI in precision medicine.

Authors:  Tayo Obafemi-Ajayi; Andy Perkins; Bindu Nanduri; Donald C Wunsch Ii; James A Foster; Joan Peckham
Journal:  AI Ethics       Date:  2021-11-29

5.  NeuroSCORE is a genome-wide omics-based model that identifies candidate disease genes of the central nervous system.

Authors:  Kyle W Davis; Colleen G Bilancia; Megan Martin; Rena Vanzo; Megan Rimmasch; Yolanda Hom; Mohammed Uddin; Moises A Serrano
Journal:  Sci Rep       Date:  2022-03-31       Impact factor: 4.379

Review 6.  Analyzing Precision Medicine Utilization with Real-World Data: A Scoping Review.

Authors:  Michael P Douglas; Anika Kumar
Journal:  J Pers Med       Date:  2022-04-01

7.  Next-generation gene panel testing in adolescents and adults in a medical neuropsychiatric genetics clinic.

Authors:  Y Trakadis; A Accogli; B Qi; D Bloom; R Joober; E Levy; K Tabbane
Journal:  Neurogenetics       Date:  2021-08-07       Impact factor: 2.660

8.  CAPICE: a computational method for Consequence-Agnostic Pathogenicity Interpretation of Clinical Exome variations.

Authors:  Shuang Li; K Joeri van der Velde; Dick de Ridder; Aalt D J van Dijk; Dimitrios Soudis; Leslie R Zwerwer; Patrick Deelen; Dennis Hendriksen; Bart Charbon; Marielle E van Gijn; Kristin Abbott; Birgit Sikkema-Raddatz; Cleo C van Diemen; Wilhelmina S Kerstjens-Frederikse; Richard J Sinke; Morris A Swertz
Journal:  Genome Med       Date:  2020-08-24       Impact factor: 11.117

9.  Solving unsolved rare neurological diseases-a Solve-RD viewpoint.

Authors:  Holm Graessner; Matthis Synofzik; Rebecca Schüle; Dagmar Timmann; Corrie E Erasmus; Jennifer Reichbauer; Melanie Wayand; Bart van de Warrenburg; Ludger Schöls; Carlo Wilke; Andrea Bevot; Stephan Zuchner; Sergi Beltran; Steven Laurie; Leslie Matalonga
Journal:  Eur J Hum Genet       Date:  2021-05-10       Impact factor: 4.246

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.