Fei Ma1, Elisabet Romero1, Michael R Jones2, Vladimir I Novoderezhkin3, Rienk van Grondelle1. 1. Department of Physics and Astronomy , Faculty of Sciences, VU University Amsterdam , De Boelelaan 1081 , 1081 HV Amsterdam , The Netherlands. 2. School of Biochemistry , University of Bristol , Biomedical Sciences Building, University Walk, Bristol BS8 1TD , United Kingdom. 3. A. N. Belozersky Institute of Physico-Chemical Biology , Moscow State University , Leninskie Gory , 119992 Moscow , Russia.
Abstract
Two-dimensional electronic spectroscopy was applied to a variant of the reaction center (RC) of purple bacterium Rhodobacter sphaeroides lacking the primary acceptor ubiquinone in order to understand the ultrafast separation and transfer of charge between the bacteriochlorin cofactors. For the first time, characteristic 2D spectra were obtained for the participating excited and charge-transfer states, and the electron-transfer cascade (including two different channels, the P* and B* channels) was fully mapped. By analyzing quantum beats using 2D frequency maps, excited-state vibrational modes at 153 and 33 cm-1 were identified. We speculate that these modes couple to the charge separation (CS) process and collectively optimize the CS and are responsible for the superhigh efficiency.
Two-dimensional electronic spectroscopy was applied to a variant of the reaction center (RC) of purple bacterium Rhodobacter sphaeroides lacking the primary acceptor ubiquinone in order to understand the ultrafast separation and transfer of charge between the bacteriochlorin cofactors. For the first time, characteristic 2D spectra were obtained for the participating excited and charge-transfer states, and the electron-transfer cascade (including two different channels, the P* and B* channels) was fully mapped. By analyzing quantum beats using 2D frequency maps, excited-state vibrational modes at 153 and 33 cm-1 were identified. We speculate that these modes couple to the charge separation (CS) process and collectively optimize the CS and are responsible for the superhigh efficiency.
Reaction center (RC) pigment–proteins
facilitate the key reaction of photosynthesis in which harvested solar
energy is used to power separation of electrical charge across a lipid
bilayer membrane.[1,2] Many of the fundamental aspects
of ultrafast light-powered charge separation (CS) have been unraveled
in the relatively simple RC from the purple bacterium Rhodobacter (Rba.) sphaeroides. The bacteriochlorin
cofactors of this RC are a pair of bacteriochlorophyll (BChl) a (P), two monomeric BChl a (B), and two
bacteriopheophytin a (H) molecules arranged in two
branches around an axis of quasi-two-fold symmetry (Figure ).[3] CS is initiated from the first singlet excited state of P (P*),
an electron being transferred to a ubiquinone (QA) via
the intervening BA and HA that make up the “active
branch” or “A-branch” of cofactors.[4] At room temperature, the P* → P+BA–,
P+BA– → P+HA–, and P+HA– → P+QA– electron-transfer
(ET) steps occur with time constants of 3–5, 0.5–1,
and ∼200 ps, respectively.[1,5] CS can also
occur via another ET channel, B* → P+BA–, with time
constants of 0.2–0.5 ps.[6,7] The CS process proceeds
with a near-unity quantum efficiency.
Figure 1
Room-temperature linear absorption spectrum
of the AM260W RC (black)
overlaid with the laser spectrum (gray). The inset shows the arrangement
of cofactors and the ET pathway in the AM260W RC, which lacks a QA acceptor due to an Ala to Trp replacement.
Room-temperature linear absorption spectrum
of the AM260W RC (black)
overlaid with the laser spectrum (gray). The inset shows the arrangement
of cofactors and the ET pathway in the AM260W RC, which lacks a QA acceptor due to an Ala to Trp replacement.Coherent two-dimensional electronic spectroscopy
(2DES) has developed
into a powerful tool for the study of excitation energy transfer (EET)
and ET dynamics in photosynthetic systems.[8−20] The related Photosystem II RC from oxygenic phototrophs has been
studied by 2DES,[14,15] but the ET cascades were difficult
to resolve because the absorption bands of the chlorin cofactors strongly
overlap, producing high signal congestion. In contrast the Rba. sphaeroides RC exhibits near-discrete absorption
bands with maxima at 865, 805, and 760 nm attributable to the P pair,
BA/BB, and HA/HB, respectively.
This raises the prospect that 2DES can resolve details of the ET kinetics
in bacterial RCs, a possibility supported by modeling.[21]To date, 2DES studies performed on Rba. sphaeroides RCs have exclusively probed EET
processes in complexes where P was
oxidized to P+[11,22,23] or kept reduced,[24] and direct observation
of the ET cascade has not been carried out. A complication in applying
2DES to native Rba. sphaeroides RCs
is that the final states P+QA– and P+QB– have recombination
lifetimes on the order of millseconds to seconds, such that P spends
significant periods in the photo-oxidized state and is unable to be
excited and to perform CS.[25] In this work,
we overcame this problem by using an engineered RC in which an alanine
at residue 260 of the M-polypeptide is replaced by tryptophan (AM260W).
This mutation causes the RC to assemble without a QA ubiquinone[26,27] such that the forward P+HA– → P+QA– ET step
is blocked and the majority of P+HA– decays to the ground state
with a lifetime of ∼17 ns.[28] As
a result, no inactive RCs with an oxidized P persist beyond the repetition
time between excitations (1 ms in this work), but the P* →
P+BA– → P+HA– ET rates are essentially identical
to those in the wild-type RC.[29]Potentially
important aspects of the mechanism of CS in the Rba.
sphaeroides RC are quantum effects, i.e., quantum
beating arising from coupling between electronic, vibrational, or
mixed (vibronic) states. Previous pump–probe experiments have
found a rich structure of oscillations,[30−33] which were thought to play a
role in efficient ET.[34] In this work, we
used 2DES to distinguish each CT intermediate along the two ET pathways
of the neutral AM260W RC and tried to understand the role of the long-lived
quantum beats in CS.The excitation pulse predominantly excited
P with some minor excitation
of B (Figure ). The
absorptive 2D spectra at five population times (T) are shown in Figure . Signals associated
with the P → P* transition, the positive ground-state bleaching
(GSB) and stimulated emission (SE) on the diagonal, and the negative
excited-state absorption (ESA) off the diagonal, appeared simultaneously
following excitation. At the same time, small GSB and ESA signals
attributable to B* also appeared, and a small cross peak centered
at (815, 870) nm ((excitation wavelength, detection wavelength)) was
visible. This cross peak may reflect dynamic coherence between P*
and B* at T = 0 fs, and later, its growth may reflect two processes:
EET or/and ET from B* to P. Both processes were fast; the EET was
complete in around 200 fs,[1,25] and the ET had a time
constant of 0.2–0.5 ps.[6,7] The 2D spectrum at T = 0 fs allowed an upper estimate of the homogeneous line
width of the exciton between the ground and excited states, which
was 340 cm–1 (2γ) determined by the full width
at half-maximum of the antidiagonal broadening of the P GSB band.
γ is the dephasing rate and is inversely proportional to the
coherence lifetime;[19] thus, the electronic
coherence lifetime was estimated to be 54 fs. The P GSB decreased
significantly during the first 50 fs, and its shape became more rounded.
This spectral diffusion reflected redistribution of the excitation
energy among the exciton state manifold coupled to the protein bath.
Figure 2
Absorptive
total 2D spectra of the AM260W RC at the indicated population
time T. Symbols λτ and λ denote the excitation and detection wavelengths,
respectively. The spectra are normalized to the maximum of the diagonal
P signal; the relative amplitude multiplier is shown below the T. The identities of particular signals are indicated in
each of the spectra: diagonal peaks are labeled with a single symbol
designating the corresponding state; cross peaks are labeled using
two symbols, with the first representing the locally excited state
and the second representing the acceptor state.
Absorptive
total 2D spectra of the AM260W RC at the indicated population
time T. Symbols λτ and λ denote the excitation and detection wavelengths,
respectively. The spectra are normalized to the maximum of the diagonal
P signal; the relative amplitude multiplier is shown below the T. The identities of particular signals are indicated in
each of the spectra: diagonal peaks are labeled with a single symbol
designating the corresponding state; cross peaks are labeled using
two symbols, with the first representing the locally excited state
and the second representing the acceptor state.Three different cross peaks appeared on a picosecond time
scale.
The positive one centered at (815, 855) nm arose with a time constant
of 430 fs. It is slower than the B* → P EET (200 fs); therefore,
most probably it corresponded to B* → P+BA– ET (labeled
“B/P”) and thus was a feature of the P+BA– CT state.
The remaining two cross peaks were negative and centered at (810,
920) and (865, 927) nm. They formed nearly synchronously on a time
scale of several picoseconds, although the weak (865, 927) nm cross
peak was partially obscured by the P GSB signal and therefore seemed
to appear later. According to previous pump–probe experiments,
the positive signal at 920–930 nm can be attributed to the
absorption of H–, with the absorption of B– centered at 1025 nm possibly making a minor contribution.[35] Control pump–probe measurements with
the same excitation and probe pulses as those used for 2DES also showed
a positive signal after a few picoseconds (Figure S1), indicating the formation of H–. The
(810, 920) and (865, 927) nm cross peaks therefore reflected ET to
HA, being features of the BA+HA– and P+HA– CT states, respectively.
The spectral shapes of all three cross peaks remained nearly unchanged
between 10 ps and 1 ns. This period corresponded to decay of P+HA– to the ground state by charge recombination or via formation of
the triplet state of P.[29]One should
note that the three CT cross peaks belonged to two different
ET channels. The (815, 855) and (810, 920) nm ones respectively corresponded
to the first and second CT state in the B* → P+BA– →
P+HA– channel. The (865, 927) nm one corresponded to the second CT state
in the P* → P+BA– → P+HA– channel.
The first CT state expected to be at around (855, 810) nm was not
observed, mainly because its decay is faster than its formation, and
furthermore, it was obscured by the P ESA. It will be revealed by
global fitting, as discussed below. Comparing the amount of formed
H– from the two channels, we can conclude that because
B* → P+BA– (0.4 ps) is faster than P* →
P+BA– (3.4 ps) ET, the B* channel is more efficient. The results show
that 2DES cannot only track the two channels but also provides a way
to quasi-quantitatively assess the relative yield of competing channels,
which is almost impossible in 1D measurements.To obtain the
spectral features and evolution time constants of
each ET species, a global analysis was applied. The fitting was started
with a parallel or a sequential model, which respectively gave decay
associated spectra (DAS) or evolution associated spectra (EAS).[13,17,18,36] Both models gave the same characteristic time constants: 29 fs,
430 fs, 3.4 ps, and >1 ns. Both DAS or EAS may vary from the actual
spectra of the true species involved if the model deviates from the
real dynamics through which species evolve. For example, in the present
case, the DAS (Figure a) of species B and C did not exhibit the features that each CT species
should exhibit. This discrepancy was because the real dynamic processes
are principally sequential for each ET channel (Figure b). Furthermore, according to the well-established
cascade scheme for ET in the bacterial RC, a four-component sequential
model with a faster third step than second step (i.e., k2 < k3) best agrees with
the real situation of the P* ET channel (Figure c). The spectra obtained with this model
are referred to as species associated spectra (SAS). Comparison of
the EAS (Figure b)
and SAS (Figure c)
showed that the biggest difference was for species C, which is the
second of the two species involved in the dynamic inversion. Spectra
of the other species were not affected by the inversion. Furthermore,
this difference was pronounced for the P* ET channel, while it had
much smaller influence on the B* channel.
Figure 3
2D DAS (a), EAS (b),
and SAS (c) with the respective kinetic model
shown on their top. The time constants of each species are shown in
the left-top corner of each panel. The spectra are normalized to the
maximum of the diagonal P signal, and the relative amplitude multiplier
is shown below the time constant. The 2D spectral regions corresponding
to the P* and B* channels are shown within dark green and pink windows,
respectively, in the last plot of (c).
2D DAS (a), EAS (b),
and SAS (c) with the respective kinetic model
shown on their top. The time constants of each species are shown in
the left-top corner of each panel. The spectra are normalized to the
maximum of the diagonal P signal, and the relative amplitude multiplier
is shown below the time constant. The 2D spectral regions corresponding
to the P* and B* channels are shown within dark green and pink windows,
respectively, in the last plot of (c).Each intermediate state along the ET cascade was well resolved
in the four SAS. As discussed above, the SAS model agrees with the
P* ET channel; therefore, below we will focus on the 2D spectra region
of this channel (the dark green window in Figure c). The first SAS corresponded to P* at the
Franck–Condon point. Its lifetime was very short, 29 fs, due
to fast spectral diffusion. The second SAS contained also the GSB,
SE, and ESA signals. The GSB peak was nearly symmetrically broadened
along the antidiagonal direction, and its center position, (872, 869)
nm, was red-shifted by about 5 nm along the diagonal compared to that
of the first SAS, (863, 865) nm. This indicated that a new equilibrium
of the excitonic state’s manifold was established. An electron
was then transferred from P* to BA, the 3.4 ps lifetime
of P* being determined by the P* → P+BA– CT rate.The third SAS contained positive ESA signals for P and B and two
symmetrical cross peaks relative to the diagonal. The above-diagonal
cross peak centered at (870, 820) nm corresponded to P* → P+BA– ET, while the below-diagonal cross peak centered at (810, 855) nm
corresponded to B* → P+BA– ET. They both reflected the properties
of the P+BA– CT state, but with different origins. We can see that
the P+BA– CT state that originated from P* was only resolved
by fitting with a correct model. The third SAS had a lifetime of 430
fs, which should be determined by the P+BA– → P+HA– ET
rate. However, the time constant of B* → P+BA– CS was
also close to this value, 0.2–0.5 ps; therefore, it is difficult
to distinguish the two dynamic processes.The last SAS was more
complex, containing weak GSB and ESA signals
for both P and B, two positive cross peaks representing P+BA–,
and two negative cross peaks centered at (810, 912) and (882, 905)
nm. The latter corresponded to the formation of H– from B* and P* ET, respectively, bearing the features of BA+HA– and P+HA– CT states.
Thus, this SAS exhibited not only features of the P+HA– state,
which is the fourth and final species, but also features of the other
CT states that are preceding intermediates in the ET cascade. This
SAS decayed only a little until the maximal delay time of 1 ns used
in this work, consistent with the measured lifetime of this state
in the AM260W RC of 17 ns.[28] To summarize,
the sequential ET processes from P to HA were fully traced
by 2DES to be . In accord with previous observations that
P+BA– decayed much faster than it formed, it was nearly spectrally invisible
in raw data and was only revealed by global fitting using the correct
model.In the B* ET channel (the pink window in Figure c), the rise time constants
of the B/P and
B/H cross peaks were 430 fs and 3.4 ps. Therefore, the dynamic evolution
may be better described with EAS than SAS, although the EAS and SAS
in this 2D spectral region did not exhibit essential difference. From
the above results, we can see that the 2D spectra of each CT intermediate
state exhibited more distinguishing characteristics than those that
can be observed in 1D measurements, being an advantage of exploiting
2DES for complex systems.The 2D spectra exhibited long-lived
(up to 2 ps) oscillations. Figure a presents a summary
Fourier transform (FT) power spectrum obtained by summing the squared
absolute value (Frobenius norm) of the FTs of the T traces across the 2D spectra. The prominent frequencies were 33,
63, 153, and 235 cm–1. These frequencies were consistent
with those determined previously by pump–probe measurements.[31,32] Also, the 33, 63, and 153 cm–1 frequencies have
their correspondences in resonance Raman spectrum,[37] 33, 70, and 145 cm–1.
Figure 4
(a) Summary FT power
spectrum of the oscillations in the real rephasing
signal (0–2 ps). (b–e) 2D frequency maps of the four
ωT frequencies computed from the real-valued rephasing
spectra (top) and from the complex-valued rephasing spectra (middle:
−ωT; bottom: +ωT).
(a) Summary FT power
spectrum of the oscillations in the real rephasing
signal (0–2 ps). (b–e) 2D frequency maps of the four
ωT frequencies computed from the real-valued rephasing
spectra (top) and from the complex-valued rephasing spectra (middle:
−ωT; bottom: +ωT).To understand the origin of the
oscillations, 2D frequency maps
were analyzed. The ±ωT frequency maps were yielded
from the real part of the rephasing data, while the separate −ωT and +ωT frequency maps were from the full
complex part. It has been shown that the characteristic patterns and
symmetries in the frequency maps can help to distinguish electronic,
vibrational, or mixed coherences.[38−42] The ±63 cm–1 frequency map
(Figure b for rephasing
and Figure S2 for non-rephasing) was dominated
by the diagonal peak, indicating that corresponding oscillations origined
from vibrational coherence.[39] The features
of the −63 and +63 cm–1 frequency maps resembled
those in a carefully designed experiment for identifying vibrational
coherence.[41] The below-diagonal peak in
the +ωT rephasing frequency map reflects ground-state
vibrational superpositions, while the above-diagonal peak in the −ωT rephasing frequency map reflects excited-state vibrational
superpositions.[40,41] Therefore, the oscillation with
63 cm–1 could be assigned to vibrational coherence
in both ground and excited states. It is notable that a peak at about
(865, 805) nm appeared in all the frequency maps and was the most
pronounced in the 33 cm–1 ones. It could be from
the contribution of B. Below our analysis would focus on the main
P peak.The features of the 33, 153, and 235 cm–1 frequency
maps (Figure c–e)
were different. First of all, in the ±ωT rephasing
frequency maps, the diagonal peak disappeared; instead, two off-diagonal
peaks appeared symmetrically along the diagonal. It indicated a different
coherent nature from that for the 63 cm–1 oscillation.
Second, for 33 and 153 cm–1, the dominant peak was
below-diagonal in the −ωT rephasing frequency
map, while it was above-diagonal in the +ωT rephasing
frequency map, which was opposite from the 63 cm–1 case. For 235 cm–1, the features were a bit deviated;
both above- and below-diagonal peaks with comparable amplitudes appeared
in each −ωT and +ωT rephasing
frequency maps. The features observed in the 33 and 153 cm–1 frequency maps can be explained by strongly coupled excited-state
vibronic coherence.[39,42]Long-lived vibronic coherence
was found responsible for increasing
the rate of EET[11] and CS[14,15] in the RC. It was thought that resonant electronic–vibrational
coupling can sustain coherences between electronic states,[43,44] which, however, was doubted later.[45] Very
recently, the essence of vibronic coherence was proposed to be excited-state
vibrational coherences shifted to the ground state as a result of
a release of electronic energy during EET, which was concluded from
the vibronic coherence coupled with the H* → B→P EET
process in the Rba. sphaeroides RC.[46] On the basis of this mechanism, the 33 and 153
cm–1 oscillations can be assigned to excited-state
vibronic coherence followed by a shift into the ground-state vibrational
coherence. The assignment of the 235 cm–1 oscillations
was not as definite as the 33 and 153 cm–1 ones.
It may be weakly coupled vibronic coherence.Universal appearance
of vibrational modes coupling in the CS process
in RCs (both bacterial and high plant) has attracted much theoretical
interest in how coupling of specific vibrational modes facilitates
this process. Our previous simulation of the Rba. sphearoides RC based on Redfield theory revealed that nonequilibrated vibrational
modes are involved in CS and determine the dynamics of the excited-state
wavepacket.[34] Two modes were identified:
the 130 cm–1 one connecting with the intermolecular
dynamics within P and the 32 cm–1 one responsible
for stabilization of the primary CT state. Later, ab initio molecular
dynamics simulation found that coupling with two vibrational modes,
50 and 100 cm–1, leads to unidirectional displacement
of electron density to establish the CT state.[47,48] Redfield theory simulation of the Photosystem II RC revealed that
resonant vibrations can modify delocalization of the exciton states
and thus promote direct CS.[49,50]Our finding that
the 153 and 33 cm–1 modes appeared
as excited-state vibronic coherence matches very well with the simulation
results. Furthermore, the 153 cm–1 mode, assigned
to be associated with the internal CT state within P,[34] did not appear in the 2DES measurement of the oxidized Rba. sphaeroides RC,[46] implying that it couples to the CS process. Hence we speculate that
excitation of them facilitates the CS process in the Rba. sphaeroides RC. This vibronic coherence mechanism
could be responsible for the superhigh efficiency of natural photochemical
CS, which may offer a blueprint for constructing photochemical devices
with high energy conversion efficiencies using abundant materials.
Authors: Elisabetta Collini; Cathy Y Wong; Krystyna E Wilk; Paul M G Curmi; Paul Brumer; Gregory D Scholes Journal: Nature Date: 2010-02-04 Impact factor: 49.962
Authors: Vladimir I Novoderezhkin; Elisabet Romero; Javier Prior; Rienk van Grondelle Journal: Phys Chem Chem Phys Date: 2017-02-15 Impact factor: 3.676
Authors: Moira L Flanagan; Phillip D Long; Peter D Dahlberg; Brian S Rolczynski; Sara C Massey; Gregory S Engel Journal: J Phys Chem A Date: 2015-12-16 Impact factor: 2.781
Authors: Harry W Rathbone; Jeffery A Davis; Katharine A Michie; Sophia C Goodchild; Neil O Robertson; Paul M G Curmi Journal: Biophys Rev Date: 2018-09-22
Authors: Fei Ma; Elisabet Romero; Michael R Jones; Vladimir I Novoderezhkin; Long-Jiang Yu; Rienk van Grondelle Journal: Photosynth Res Date: 2021-10-28 Impact factor: 3.573
Authors: Shiun-Jr Yang; Eric A Arsenault; Kaydren Orcutt; Masakazu Iwai; Yusuke Yoneda; Graham R Fleming Journal: Proc Natl Acad Sci U S A Date: 2022-10-10 Impact factor: 12.779
Authors: Fei Ma; Elisabet Romero; Michael R Jones; Vladimir I Novoderezhkin; Rienk van Grondelle Journal: Nat Commun Date: 2019-02-25 Impact factor: 14.919