| Literature DB >> 29584687 |
Saleem A Banihani1, Khawla F Abu-Alia2, Omar F Khabour3, Karem H Alzoubi4.
Abstract
Atopic dermatitis (AD) is a chronic, relapsing, and inflammatory skin disorder. It is characterized by an inappropriate skin barrier function, allergen sensitization, and recurrent skin infections. Resistin is an adipokine expressed mainly in macrophages and monocytes; it has a role in the inflammatory process and is associated with multiple inflammatory human diseases; however, only few studies linked resistin to atopic dermatitis. This study tested the association between G>A (rs3745367) and C>T (rs3219177) single nucleotide polymorphisms (SNPs) of the RETN gene with atopic dermatitis. In addition, it explored the relationship between serum resistin protein and atopic dermatitis. To achieve objectives of this study, 162 atopic dermatitis patients and 161 healthy participants were recruited in the study. A significant association was detected between rs3745367 and atopic dermatitis with age and gender specificity (p < 0.05), while no significant association between rs3219177 and atopic dermatitis was found (p > 0.05). For the serum resistin levels, a significant decrease was indicated in atopic dermatitis patients compared to healthy subjects (p < 0.05). In conclusion, rs3745367 may play a gender and age-specific role in atopic dermatitis. In addition, the significant decrease in the resistin protein level confirmed this association.Entities:
Keywords: atopic dermatitis; polymorphisms; resistin gene
Mesh:
Substances:
Year: 2018 PMID: 29584687 PMCID: PMC6023010 DOI: 10.3390/biom8020017
Source DB: PubMed Journal: Biomolecules ISSN: 2218-273X
Single nucleotide polymorphisms (SNPs ID), PCR primers, PCR conditions and restriction conditions.
| SNP ID | Primer Sequence | PCR Annealing T (°C) | Restriction Enzyme, Incubation Conditions | Fragment Length (bp) |
|---|---|---|---|---|
| rs3745367 | F: GGAAGAAGCCATCAATGAGAGG | 58 | Alu I, | GG➔ 14, 71, 243 |
| rs3219177 | F: AGTGACAGCTGCTCCTGCG | 58 | BspCN I, | CC➔ 48, 376, 351 |
General characteristics of the participants.
| Variable | Control | Patient | |
|---|---|---|---|
| Gender | |||
| Male | 82 (50.9%) | 82 (50.6%) | 0.955 |
| Female | 79 (49.1%) | 80 (49.4%) | |
| Total | 161 | 162 | |
| Age groups | |||
| New Born–10 years | 94 (58.4%) | 92 (56.8%) | 0.885 |
| 11–20 years | 36 (22.4%) | 40 (24.7%) | |
| >20 | 31 (19.2%) | 30 (18.5%) | |
Genotype and allele frequencies of rs3219177 and rs3745367 of RETN gene in atopic dermatitis (AD) subjects and controls.
| Genotypes and Alleles | Control | Patient | |
|---|---|---|---|
| rs3219177 | |||
| CC | 113 (70.2%) | 107 (66.0%) | 0.219 |
| TT | 4 (2.5%) | 1 (0.6%) | |
| CT | 44 (27.3%) | 54 (33.4%) | |
| Allele C | 157 (76.6%) | 161 (74.5%) | 0.625 |
| Allele T | 48 (23.4%) | 55 (25.5%) | |
| rs3745367 | |||
| GG | 52 (32.3%) | 76 (46.9%) | 0.023 |
| AA | 32 (19.9%) | 22 (13.6%) | |
| GA | 77 (47.8%) | 64 (39.5%) | |
| Allele G | 129 (54.2%) | 140 (61.9%) | 0.091 |
| Allele A | 109 (45.8%) | 86 (38.1%) | |
NS: not significant.
Frequencies of RETN genotypes and alleles in males.
| Genotypes and Alleles | Control | Patient | |
|---|---|---|---|
| rs3219177 | |||
| CC | 57 (69.5%) | 54 (65.1%) | 0.255 |
| TT | 4 (4.9%) | 1 (1.2%) | |
| CT | 21 (25.6%) | 28 (33.7%) | |
| Allele C | 78 (75.7%) | 82 (73.9%) | 0.755 |
| Allele T | 25 (24.3%) | 29 (26.1%) | |
| rs3745367 | |||
| GG | 26 (31.7%) | 44 (53%) | 0.007 |
| AA | 14 (17.1%) | 5 (6%) | |
| GA | 42 (51.2%) | 34 (41%) | |
| Allele G | 40 (54.8%) | 78 (66.7%) | 0.0003 |
| Allele A | 56 (45.2%) | 39 (33.3%) | |
Frequencies of RETN genotypes and alleles in females.
| Genotypes and Alleles | Control | Patient | |
|---|---|---|---|
| rs3219177 | |||
| CC | 56 (70.9%) | 53 (67.1%) | 0.731 |
| TT | 0 (0%) | 0 (0%) | |
| CT | 23 (29.1%) | 26 (32.9%) | |
| Allele C | 79 (77.5%) | 79 (75.2%) | 0.708 |
| Allele T | 23 (22.5%) | 26 (24.8%) | |
| rs3745367 | |||
| GG | 27 (34.2%) | 30 (38%) | 0.82 |
| AA | 17 (21.5%) | 17 (21.5%) | |
| GA | 35 (44.3%) | 32 (40.5%) | |
| Allele G | 62 (54.4%) | 62 (55.9%) | 0.824 |
| Allele A | 52 (45.6%) | 49 (44.1%) | |
The frequency of RETN genotypes and alleles among different age groups.
| Age Groups | ||||||
|---|---|---|---|---|---|---|
| Genotypes and Alleles | New Born–10 years | 11–20 years | >20 years | |||
| Control | Patient | Control | Patient | Control | Patient | |
| CC | 64 (68.1%) | 58 (63%) | 27 (75%) | 27 (67.5%) | 22 (71%) | 22(73.3%) |
| TT | 2 (2.1%) | 0 (0%) | 1 (2.8%) | 1 (2.5%) | 1 (3.2%) | 0 (0%) |
| CT | 28 (29.8%) | 34 (37%) | 8 (22.2%) | 12 (30%) | 8 (25.8%) | 8 (26.7%) |
| 0.24 | 0.798 | 1.00 | ||||
| Allele C | 92 (75.4%) | 92 (73%) | 35 (79.5%) | 39 (75%) | 30 (77%) | 30(78.9%) |
| Allele T | 30 (24.6%) | 34 (27%) | 9 (20.5%) | 13 (25%) | 9 (23%) | 8 (21.1%) |
| 0.667 | 0.598 | 0.83 | ||||
| GG | 30 (31.9%) | 47 (51.1%) | 11 (30.6%) | 16 (40%) | 11 (35.5%) | 13(43.3%) |
| AA | 19 (20.2%) | 12 (13%) | 9 (25%) | 4 (10%) | 4 (12.9%) | 6 (20%) |
| GA | 45 (47.9%) | 33 (35.9%) | 16 (44.4%) | 20 (50%) | 16 (51.6) | 11(36.7%) |
| 0.028 | 0.243 | 0.516 | ||||
| Allele G | 75 (54%) | 80 (64%) | 27 (51.9%) | 36 (60%) | 27 (57.4%) | 24(58.5%) |
| Allele A | 64 (46%) | 45 (36%) | 25 (48.1%) | 24 (40%) | 20 (42.6%) | 17(41.5%) |
| 0.098 | 0.39 | 0.918 | ||||
Figure 1Serum resistin levels in AD and control groups. The data are from 150 subjects (75 patients and 75 controls). Results are mean + SEM. A significant decrease in serum resistin levels in AD patients was detected compared to the control groups (p = 0.0002).