| Literature DB >> 29583153 |
Luis Eduardo Soares1,2, Márcia Goetze1, Camila M Zanella1,3, Fernanda Bered1.
Abstract
The Southern Brazilian Highlands are composed by a mosaic of Mixed Ombrophilous Forest (MOF) and grassland formations, an interesting landscape for the study of population structure. We analyzed the genetic diversity within and among populations of the MOF-endemic bromeliad Vriesea reitzii by genotyping seven nuclear microsatellite loci in 187 individuals from six populations. We characterized levels of genetic diversity and assessed the genetic structure among populations. Vriesea reitzii populations showed high levels of genetic variation (number of alleles 28 - 43, allelic richness 3.589 - 5.531) and moderate levels of genetic differentiation (FST = 0.123, RST = 0.096). The high levels of genetic diversity may be explained by species life-history traits, such as habit and mating system. The moderate structure may be a product of the combination of ancient and contemporary gene flow, resulting from the expansion of the forest in the Holocene, and/or due to facilitated dispersal mediated by the MOF's mosaic landscape. The genetic results indicated no imminent threat to this bromeliad. However, the species is highly associated with the MOF, putting landscape conservation at the center of conservation efforts for the species' maintenance.Entities:
Year: 2018 PMID: 29583153 PMCID: PMC5913716 DOI: 10.1590/1678-4685-GMB-2017-0062
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771
Populations of Vriesea reitzii sampled, with their vouchers and geographical parameters.
| Population Code | Sampling site | Voucher | State | Coordinates | Altitude (m) |
|---|---|---|---|---|---|
| SMPR | São Mateus do Sul | UPCB36191 | PR | S25°52’ W50°18’ | 778 |
| CASC | Campo Alegre | RB00287263 | SC | S26°10’ W49°13’ | 977 |
| PDSC | Papanduva | - | SC | S26°30’ W50°14’ | 790 |
| LGSC | Lages | LUSC5573 | SC | S27°47’ W50°21’ | 1031 |
| CSRS | Cambará do Sul | HAS30158 | RS | S29°08’ W50°05’ | 977 |
| SFRS | São Francisco de Paula | HAS66297 | RS | S29°26’ W50°36’ | 927 |
Brazilian Federal States: RS, Rio Grande do Sul; SC, Santa Catarina; PR, Paraná.
Unable to retrieve voucher from this population.
UPBC, Herbarium Departamento de Botânica, Universidade Federal do Paraná; RB, Herbário do Jardim Botânico do Rio de Janeiro; LUSC, Herbarium Lages da Universidade Federal de Santa Catarina; HAS, Herbário Prof. Dr. Alarich Rudolf Holger Schultz, Museu de Ciências Naturais da Fundação Zoobotânica do Rio Grande do Sul.
Figure 1Brazilian map highlighting the southern region with Mixed Ombrophilous Forest in gray. The six Vriesea reitzii populations sampled for this study are marked according to legend.
Characterization of genetic variability in six populations of Vriesea reitzii.
| Population | N |
| A | AP |
|
|
|
|
|---|---|---|---|---|---|---|---|---|
| SMPR | 31 | 0.732 | 28 | 1 | 3.589 | 0.411 | 0.452 | 0.089 |
| CASC | 31 | 0.732 | 42 | 4 | 5.531 | 0.438 | 0.629 | 0.310 |
| PDSC | 30 | 0.729 | 31 | 0 | 3.846 | 0.360 | 0.504 | 0.286 |
| LGSC | 32 | 0.733 | 43 | 6 | 5.307 | 0.499 | 0.533 | 0.019 |
| CSRS | 32 | 0.733 | 38 | 1 | 4.955 | 0.493 | 0.571 | 0.137 |
| SFRS | 31 | 0.732 | 40 | 3 | 5.100 | 0.419 | 0.515 | 0.167 |
population is considered to have undergone a bottleneck if its M-ratio value falls below the threshold of critical M-ratio calculated (0.61). No bottlenecks were detected in the six populations.
Inbreeding coefficient (F IS) which departed significantly from Hardy–Weinberg equilibrium (HWE) at the P < 0.001 level.
Pairwise genetic divergence (F ST) below the diagonal and number of effective migrants (N em) per generation above the diagonal, for Vriesea reitzii populations based on seven microsatellite loci.
| SMRS | CASC | PDSC | LGSC | CSRS | SFRS | |
|---|---|---|---|---|---|---|
| SMRS | 0.377 | 0.145 | 1.161 | 0.748 | 0.933 | |
| CASC |
| 1.605 | 1.103 | 2.541 | 2.671 | |
| PDSC | 0.044 |
| 0.663 | 0.584 | 0.741 | |
| LGSC |
| 0.015 |
| 1.611 | 1.200 | |
| CSRS | 0.030 | 0.029 | 0.039 |
| 0.923 | |
| SFRS |
|
|
|
| 0.043 |
Figure 2Population structure in Vriesea reitzii using Bayesian assignment analysis for a K = 3 population model based of seven nuclear microsatellite loci. See Table 1 for population identification.