| Literature DB >> 29580923 |
Mandy J Schmella1, James M Roberts2, Yvette P Conley3, Dianxu Ren4, Gro L Storvold5, Sue A Ingles6, Melissa L Wilson7, Anne Catherine Staff8, Carl A Hubel9.
Abstract
OBJECTIVE: The purpose of this study was to validate our previous genetic association findings related to the endoglin (ENG) pathway from an American Caucasian preeclampsia cohort in independent preeclampsia cohorts. We also sought to explore the ENG pathway for new genetic associations in these independent cohorts. STUDYEntities:
Keywords: Candidate gene; Endoglin; Genetic association; Preeclampsia; Pregnancy
Mesh:
Substances:
Year: 2017 PMID: 29580923 PMCID: PMC5995147 DOI: 10.1016/j.preghy.2017.10.005
Source DB: PubMed Journal: Pregnancy Hypertens ISSN: 2210-7789 Impact factor: 2.899
Tagging and potentially functional single nucleotide polymorphisms assayed.
| Candidate Gene | SNP rs numbers |
|---|---|
| Endoglin ( | rs10987746, rs10819309, rs10760505, |
| Transforming growth factor beta 1 ( | rs8179181, rs4803455, rs11466314, rs1800469, |
| Transforming growth factor beta 1 receptor ( | rs6478974, rs10739778, rs420549 |
| Activin receptor like kinase 1 ( | rs3759178, rs11169953, rs706819 |
| Transforming growth factor beta receptor 2 ( | rs3087465, |
Abbreviations: SNP, single nucleotide polymorphism. Notes: Bolded SNPs indicate the high priority SNPs analyzed in Tier 1 of this study. Underlined SNPs indicate the SNPs that were not successfully genotyped with iPLEX®.
Demographic and clinical characteristics for Norwegian cohort.
| Characteristic | Cases (n = 77) | Controls (n = 63) | p |
|---|---|---|---|
| Maternal age at delivery, years [mean ± SD] | 31.8 ± 4.7 | 32.0 ± 4.6 | .75 |
| Nulliparous [n (%)] | 48 (62.3%) | 35 (55.6%) | .42 |
| Gestational age at delivery (weeks) [median (min-max)] | 33.9 (24.9–39.4) | 38.7 (37.1–41.9) | <.001 |
| Pre-pregnancy BMI (kg/m2) [median (min-max)] | 23.7 (18.9–41.1) | 22.3 (17.4–30.7) | .004 |
| Smoked during pregnancy [n (%)] | 8 (10.4%) | 6 (9.5%) | .87 |
Abbreviations: BMI (kg/m2), body mass index (kilograms/meters squared). Notes: Pre-pregnancy BMI includes BMI pre-pregnancy or within the first trimester of pregnancy.
Demographic and clinical characteristics for Latina cohort.
| Characteristic | Cases (n = 69) | Controls (n = 106) | p-value |
|---|---|---|---|
| Maternal age at delivery, years [median (min–max)] | 26.0 (17.0, 45.0) | 25.0 (15.0, 42.0) | .3 |
| Nulliparous (n, %) | 31 (44.9%) | 38 (35.8%) | .2 |
| Gestational age at delivery (weeks) [median (min–max)] | 37.0 (25.0, 41.0) | 40.0 (37.0, 42.0) | <.001 |
| Pre-pregnancy BMI (kg/m2) | 26.8 (19.6, 39.6) | 24.2 (17.0, 41.8) | .02 |
| Smoked during pregnancy | 7 (10.9%) | 4 (4.0%) | .08 |
Abbreviations: BMI (kg/m2), body mass index (kilograms/meters squared).
Notes:
n = 11 controls and n = 2 cases were missing pre-pregnancy BMI values.
n = 6 controls and n = 5 cases were missing values on smoking during pregnancy.
Multivariate logistic regression results in the Norwegian cohort: ENG Pathway Candidate Gene tSNPs Associated (p < .05) with Pregnancy Outcome.
| Gene/tSNP | Genotype Distributions | HWE | Genotype Comparisons | aOR [95% CI] | p | |
|---|---|---|---|---|---|---|
| Cases: n (%) | Controls: n (%) | |||||
| TGFβR1(ALK5)/rs6478974 | AA: 16 (20.8) | AA: 23 (36.5) | NS | TA vs AA | 2.38 [1.007–5.60] | 0.05 |
| TT: 16 (20.8) | TT: 13 (20.6) | |||||
| TA: 45 (58.4) | TA: 27 (42.9) | |||||
| AA: 12 (16.4) | AA: 18 (29.0) | 0.02 | TT vs AA | 5.01 [1.39–18.01] | 0.01 | |
| TT: 16 (21.9) | TT: 8 (12.9) | TA + TT vs AA | 2.48 [1.001–6.17] | 0.05 | ||
| TA: 45 (61.6) | TA: 36 (58.1) | |||||
| GG: 24 (32.9) | GG: 14 (22.6) | 0.04 | AA vs. GG | 0.17 [0.05–0.64] | 0.009 | |
| AA: 6 (8.2) | AA: 13 (21.0) | AA vs. AG + GG | 0.27 [0.09–0.85] | 0.02 | ||
| AG: 43 (58.9) | AG: 35 (56.5) | |||||
| GG: 32 (43.8) | GG: 20 (32.3) | NS | AA vs. GG | 0.27 [0.07–0.99] | 0.05 | |
| AA: 5 (6.8) | AA: 11 (17.7) | |||||
| GA: 36 (49.3) | GA: 31 (50.0) | |||||
| AA: 42 (57.5) | AA: 33 (54.1) | NS | AA vs. TT | 9.86 [1.04–93.33] | 0.05 | |
| TT: 1 (1.4) | TT: 6 (9.8) | AT vs. TT | 13.17 [1.31–132.21] | 0.03 | ||
| AT: 30 (41.1) | AT: 22 (36.1) | AT + AA vs. TT | 10.73 [1.15–100.12] | 0.04 | ||
| GG: 19 (26.0) | GG: 14 (22.6) | NS | AG vs AA | 3.28 [1.28–8.36] | 0.01 | |
| AA: 14 (19.2) | AA: 22 (35.5) | AG + GG vs AA | 3.08 [1.27–7.43] | 0.01 | ||
| AG: 40 (54.8) | AG: 26 (41.9) | |||||
Abbreviations: tSNP, tagging single nucleotide polymorphism; MAF, minor allele frequency; HWE, Hardy-Weinberg Equilibrium; aOR, adjusted odds ratio; CI, confidence interval; NS, non-significant (p > .05).
Notes:
HWE assessed with Chi-square or Exact tests.
The reference group for Pregnancy Outcome is the Case group. The multivariate logistic regression models were adjusted for maternal age, parity, pre-pregnancy BMI, smoking, and infant sex.
HWE was also assessed separately in cases and controls. The control group was in HWE while the case group was out of HWE.
Multivariate logistic regression results in the Latina cohort: ENG pathway Candidate gene tSNPs associated (p < .05) with pregnancy outcome.
| Gene/tSNP | Genotype Distributions | HWE | Genotype Group Comparisons | aOR [95% CI] | p | |
|---|---|---|---|---|---|---|
| Cases: n(%) | Controls: n(%) | |||||
| GG: 24 (35.3) | GG: 19 (18.1) | NS | GG vs GA | 3.59 [1.51–8.53] | 0.004 | |
| AA: 29 (42.0) | AA: 29 (28.2) | NS | GG vs GA | 0.37 [0.14–1.0] | 0.05 | |
Abbreviations: tSNP, tagging single nucleotide polymorphism; MAF, minor allele frequency; HWE, Hardy-Weinberg Equilibrium; aOR, adjusted odds ratio; CI, confidence interval; NS, non-significant (p > .05).
Notes:
HWE assessed with Chi-square or Exact tests.
The reference group for Pregnancy Outcome is the Case group. The multivariate logistic regression models were adjusted for maternal age, parity, pre-pregnancy BMI, smoking, and infant sex.