Literature DB >> 29570036

Anti-miRNA oligonucleotides: A comprehensive guide for design.

Joana Filipa Lima1,2,3,4, Laura Cerqueira1,2, Ceu Figueiredo3,4,5, Carla Oliveira3,4,5, Nuno Filipe Azevedo1.   

Abstract

MicroRNAs (miRNAs) are small, non-coding RNA molecules that regulate gene expression post-transcriptionally. As a consequence of their function towards mRNA, miRNAs are widely associated with the pathogenesis of several human diseases, making miRNAs a target for new therapeutic strategies based on the control of their expression. Indeed, numerous works were published in the past decades showing the potential use of antisense oligonucleotides to target aberrant miRNAs (AMOs) involved in several human pathologies. New classes of chemical-modified-AMOs, including locked nucleic acid oligonucleotides, have recently proved their worth in silencing miRNAs. A correct design of a specific AMOs can help to improve their performance and potency towards the target miRNA by increasing for instance nuclease resistance and target affinity. This review outlines the technologies involved to suppress aberrant miRNAs. From the design strategies used in AMOs to its application in novel miRNA-based therapeutics and detection methodologies.

Entities:  

Keywords:  AMO design; anti-miRNA; chemical modifications; miRNA; miRNA detection methods; therapeutics

Mesh:

Substances:

Year:  2018        PMID: 29570036      PMCID: PMC5927725          DOI: 10.1080/15476286.2018.1445959

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  135 in total

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2.  MiR-9 downregulates CDX2 expression in gastric cancer cells.

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Journal:  Int J Cancer       Date:  2011-03-25       Impact factor: 7.396

Review 3.  Prediction of melting temperatures in fluorescence in situ hybridization (FISH) procedures using thermodynamic models.

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Journal:  Crit Rev Biotechnol       Date:  2015-01-14       Impact factor: 8.429

4.  Sensitive and specific detection of microRNAs by northern blot analysis using LNA-modified oligonucleotide probes.

Authors:  Anna Válóczi; Csaba Hornyik; Nóra Varga; József Burgyán; Sakari Kauppinen; Zoltán Havelda
Journal:  Nucleic Acids Res       Date:  2004-12-14       Impact factor: 16.971

5.  miR-9 is an essential oncogenic microRNA specifically overexpressed in mixed lineage leukemia-rearranged leukemia.

Authors:  Ping Chen; Colles Price; Zejuan Li; Yuanyuan Li; Donglin Cao; Anissa Wiley; Chunjiang He; Sandeep Gurbuxani; Rejani B Kunjamma; Hao Huang; Xi Jiang; Stephen Arnovitz; Mengyi Xu; Gia-Ming Hong; Abdel G Elkahloun; Mary Beth Neilly; Mark Wunderlich; Richard A Larson; Michelle M Le Beau; James C Mulloy; Paul P Liu; Janet D Rowley; Jianjun Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-24       Impact factor: 11.205

6.  Tumor imaging by means of proteolytic activation of cell-penetrating peptides.

Authors:  Tao Jiang; Emilia S Olson; Quyen T Nguyen; Melinda Roy; Patricia A Jennings; Roger Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-15       Impact factor: 11.205

7.  Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers.

Authors:  George Adrian Calin; Cinzia Sevignani; Calin Dan Dumitru; Terry Hyslop; Evan Noch; Sai Yendamuri; Masayoshi Shimizu; Sashi Rattan; Florencia Bullrich; Massimo Negrini; Carlo M Croce
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-18       Impact factor: 11.205

Review 8.  Emerging Roles for MicroRNAs in Perioperative Medicine.

Authors:  Viola Neudecker; Kelley S Brodsky; Simone Kreth; Adit A Ginde; Holger K Eltzschig
Journal:  Anesthesiology       Date:  2016-02       Impact factor: 7.892

9.  MicroRNA-9 promotes proliferation of leukemia cells in adult CD34-positive acute myeloid leukemia with normal karyotype by downregulation of Hes1.

Authors:  Chen Tian; M James You; Yong Yu; Lei Zhu; Guoguang Zheng; Yizhuo Zhang
Journal:  Tumour Biol       Date:  2015-12-17

Review 10.  The role of disordered protein regions in the assembly of decapping complexes and RNP granules.

Authors:  Stefanie Jonas; Elisa Izaurralde
Journal:  Genes Dev       Date:  2013-12-15       Impact factor: 11.361

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  51 in total

1.  Delivery of Peptide Nucleic Acids Using an Argininocalix[4]arene as Vector.

Authors:  Alessia Finotti; Jessica Gasparello; Alessandro Casnati; Roberto Corradini; Roberto Gambari; Francesco Sansone
Journal:  Methods Mol Biol       Date:  2021

2.  Bioinformatic Tools and Guidelines for the Design of Fluorescence In Situ Hybridization Probes.

Authors:  Helena Teixeira; Ana L Sousa; Andreia S Azevedo
Journal:  Methods Mol Biol       Date:  2021

Review 3.  Uncovering epigenetic landscape: a new path for biomarkers identification and drug development.

Authors:  Daiane Teixeira de Oliveira; Renata Guerra-Sá
Journal:  Mol Biol Rep       Date:  2020-10-21       Impact factor: 2.316

4.  Sperm miR-34c-5p Transcript Content and Its Association with Sperm Parameters in Unexplained Infertile Men.

Authors:  Mehran Dorostghoal; Hamid Galehdari; Masoud Hemadi; Elahe Davoodi
Journal:  Reprod Sci       Date:  2021-09-07       Impact factor: 3.060

Review 5.  Parkinson's disease and microRNAs - Lessons from model organisms and human studies.

Authors:  Brian Evans; Howard A Furlong; Alexandre de Lencastre
Journal:  Exp Gerontol       Date:  2021-10-08       Impact factor: 4.032

Review 6.  Pharmacokinetics and Proceedings in Clinical Application of Nucleic Acid Therapeutics.

Authors:  Markus Herkt; Thomas Thum
Journal:  Mol Ther       Date:  2020-11-12       Impact factor: 11.454

Review 7.  Alzheimer's Disease and microRNA-132: A Widespread Pathological Factor and Potential Therapeutic Target.

Authors:  Meng Zhang; Zhigang Bian
Journal:  Front Neurosci       Date:  2021-05-24       Impact factor: 4.677

8.  Pro-tumoral functions of tumor-associated macrophage EV-miRNA.

Authors:  Alexander Cocks; Filippo Del Vecchio; Verena Martinez-Rodriguez; Monique Schukking; Muller Fabbri
Journal:  Semin Cancer Biol       Date:  2021-08-08       Impact factor: 15.707

9.  Stable duplex-linked antisense targeting miR-148a inhibits breast cancer cell proliferation.

Authors:  Sho Okumura; Yu Hirano; Yasuo Komatsu
Journal:  Sci Rep       Date:  2021-06-01       Impact factor: 4.379

Review 10.  Noncoding RNA therapeutics - challenges and potential solutions.

Authors:  Melanie Winkle; Sherien M El-Daly; Muller Fabbri; George A Calin
Journal:  Nat Rev Drug Discov       Date:  2021-06-18       Impact factor: 84.694

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