Literature DB >> 29569161

Genetic variation of 17 X-chromosome STR loci in Tunisian population of Nabeul.

Monia Messoussi1, Endika Prieto-Fernández2, Miriam Baeta2, Carolina Núñez2, Amel Ben Ammar-El Gaaied1, Marian M de Pancorbo2, Karima Fadhlaoui-Zid3.   

Abstract

In the present study, the genetic variations of 17 X-STR markers (DXS8378, DXS9898, DXS7133, GATA31E08, GATA172D05, DXS6801, DXS7423, DXS6809, DXS6799, DXS7132, DXS9902, DXS6800, DXS6789, DXS10075, DXS10079, DXS6807, and DXS6803) were analyzed in 139 unrelated individuals in Nabeul, aiming to perform an X-STR database for anthropological and forensic purposes. Our results indicate that DXS6809 was the most polymorphic locus, whereas DXS6807 was the least informative marker. In addition, the obtained values for the statistical parameters of forensic interest, i.e., the power of discrimination in males (PDM) and females (PDF), as well as the mean exclusion chance in duos (MECD) and trios (MECT) have demonstrated that this panel of 17 X-STRs is highly informative and useful for forensic application and anthropological research. Additionally, pairwise genetic distances based on FST were calculated between Nabeul population and other populations extracted from the literature. Genetic distances were represented in a non-metric MDS plot and clustering of populations according to their geographic locations and their historical relationship was detected.

Entities:  

Keywords:  Forensic application; Nabeul city; Short tandem repeat; Tunisia; X-chromosome database

Mesh:

Substances:

Year:  2018        PMID: 29569161     DOI: 10.1007/s00414-018-1827-3

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  2 in total

1.  Study of 17 X-STRs in Native American and Mestizo populations of Central America for forensic and population purposes.

Authors:  Miriam Baeta; Endika Prieto-Fernández; Carolina Núñez; Tamara Kleinbielen; Patricia Villaescusa; Leire Palencia-Madrid; Oscar Alvarez-Gila; Begoña Martínez-Jarreta; Marian M de Pancorbo
Journal:  Int J Legal Med       Date:  2021-03-19       Impact factor: 2.686

2.  Polymorphism and haplotype analysis of three novel short tandem repeat loci in the p11.4 region of human X chromosome.

Authors:  Takeki Nishi; Kenji Fukui; Sari Matumoto; Shojiro Takasu; Kimiharu Iwadate
Journal:  Int J Legal Med       Date:  2021-11-06       Impact factor: 2.791

  2 in total

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