Literature DB >> 29568146

Voxel-based plaque classification in coronary intravascular optical coherence tomography images using decision trees.

Chaitanya Kolluru1, David Prabhu1, Yazan Gharaibeh1, Hao Wu1, David L Wilson1,2.   

Abstract

Intravascular Optical Coherence Tomography (IVOCT) is a high contrast, 3D microscopic imaging technique that can be used to assess atherosclerosis and guide stent interventions. Despite its advantages, IVOCT image interpretation is challenging and time consuming with over 500 image frames generated in a single pullback volume. We have developed a method to classify voxel plaque types in IVOCT images using machine learning. To train and test the classifier, we have used our unique database of labeled cadaver vessel IVOCT images accurately registered to gold standard cryo-images. This database currently contains 300 images and is growing. Each voxel is labeled as fibrotic, lipid-rich, calcified or other. Optical attenuation, intensity and texture features were extracted for each voxel and were used to build a decision tree classifier for multi-class classification. Five-fold cross-validation across images gave accuracies of 96 % ± 0.01 %, 90 ± 0.02% and 90 % ± 0.01 % for fibrotic, lipid-rich and calcified classes respectively. To rectify performance degradation seen in left out vessel specimens as opposed to left out images, we are adding data and reducing features to limit overfitting. Following spatial noise cleaning, important vascular regions were unambiguous in display. We developed displays that enable physicians to make rapid determination of calcified and lipid regions. This will inform treatment decisions such as the need for devices (e.g., atherectomy or scoring balloon in the case of calcifications) or extended stent lengths to ensure coverage of lipid regions prone to injury at the edge of a stent.

Entities:  

Keywords:  atherosclerosis; decision tree; machine learning; optical coherence tomography

Year:  2018        PMID: 29568146      PMCID: PMC5860831          DOI: 10.1117/12.2293226

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  10 in total

1.  Consensus standards for acquisition, measurement, and reporting of intravascular optical coherence tomography studies: a report from the International Working Group for Intravascular Optical Coherence Tomography Standardization and Validation.

Authors:  Guillermo J Tearney; Evelyn Regar; Takashi Akasaka; Tom Adriaenssens; Peter Barlis; Hiram G Bezerra; Brett Bouma; Nico Bruining; Jin-man Cho; Saqib Chowdhary; Marco A Costa; Ranil de Silva; Jouke Dijkstra; Carlo Di Mario; Darius Dudek; Darius Dudeck; Erling Falk; Erlin Falk; Marc D Feldman; Peter Fitzgerald; Hector M Garcia-Garcia; Hector Garcia; Nieves Gonzalo; Juan F Granada; Giulio Guagliumi; Niels R Holm; Yasuhiro Honda; Fumiaki Ikeno; Masanori Kawasaki; Janusz Kochman; Lukasz Koltowski; Takashi Kubo; Teruyoshi Kume; Hiroyuki Kyono; Cheung Chi Simon Lam; Guy Lamouche; David P Lee; Martin B Leon; Akiko Maehara; Olivia Manfrini; Gary S Mintz; Kyiouchi Mizuno; Marie-angéle Morel; Seemantini Nadkarni; Hiroyuki Okura; Hiromasa Otake; Arkadiusz Pietrasik; Francesco Prati; Lorenz Räber; Maria D Radu; Johannes Rieber; Maria Riga; Andrew Rollins; Mireille Rosenberg; Vasile Sirbu; Patrick W J C Serruys; Kenei Shimada; Toshiro Shinke; Junya Shite; Eliot Siegel; Shinjo Sonoda; Shinjo Sonada; Melissa Suter; Shigeho Takarada; Atsushi Tanaka; Mitsuyasu Terashima; Troels Thim; Thim Troels; Shiro Uemura; Giovanni J Ughi; Heleen M M van Beusekom; Antonius F W van der Steen; Gerrit-Anne van Es; Gerrit-Ann van Es; Gijs van Soest; Renu Virmani; Sergio Waxman; Neil J Weissman; Giora Weisz
Journal:  J Am Coll Cardiol       Date:  2012-03-20       Impact factor: 24.094

2.  Semiautomatic segmentation and quantification of calcified plaques in intracoronary optical coherence tomography images.

Authors:  Zhao Wang; Hiroyuki Kyono; Hiram G Bezerra; Hui Wang; Madhusudhana Gargesha; Chadi Alraies; Chenyang Xu; Joseph M Schmitt; David L Wilson; Marco A Costa; Andrew M Rollins
Journal:  J Biomed Opt       Date:  2010 Nov-Dec       Impact factor: 3.170

3.  Characterization of atherosclerosis plaques by measuring both backscattering and attenuation coefficients in optical coherence tomography.

Authors:  Chenyang Xu; Joseph M Schmitt; Stephane G Carlier; Renu Virmani
Journal:  J Biomed Opt       Date:  2008 May-Jun       Impact factor: 3.170

4.  3D registration of intravascular optical coherence tomography and cryo-image volumes for microscopic-resolution validation.

Authors:  David Prabhu; Emile Mehanna; Madhusudhana Gargesha; Di Wen; Eric Brandt; Nienke S van Ditzhuijzen; Daniel Chamie; Hirosada Yamamoto; Yusuke Fujino; Ali Farmazilian; Jaymin Patel; Marco Costa; Hiram G Bezerra; David L Wilson
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-29

5.  Parameter estimation of atherosclerotic tissue optical properties from three-dimensional intravascular optical coherence tomography.

Authors:  Madhusudhana Gargesha; Ronny Shalev; David Prabhu; Kentaro Tanaka; Andrew M Rollins; Marco Costa; Hiram G Bezerra; David L Wilson
Journal:  J Med Imaging (Bellingham)       Date:  2015-01-02

6.  Depth-resolved model-based reconstruction of attenuation coefficients in optical coherence tomography.

Authors:  K A Vermeer; J Mo; J J A Weda; H G Lemij; J F de Boer
Journal:  Biomed Opt Express       Date:  2013-12-23       Impact factor: 3.732

7.  Atherosclerotic tissue characterization in vivo by optical coherence tomography attenuation imaging.

Authors:  Gijs van Soest; Thadé Goderie; Evelyn Regar; Senada Koljenović; Geert L J H van Leenders; Nieves Gonzalo; Sander van Noorden; Takayuki Okamura; Brett E Bouma; Guillermo J Tearney; J Wolter Oosterhuis; Patrick W Serruys; Anton F W van der Steen
Journal:  J Biomed Opt       Date:  2010 Jan-Feb       Impact factor: 3.170

8.  Measurement of the thickness of the fibrous cap by optical coherence tomography.

Authors:  Teruyoshi Kume; Takashi Akasaka; Takahiro Kawamoto; Hiroyuki Okura; Nozomi Watanabe; Eiji Toyota; Yoji Neishi; Renan Sukmawan; Yoshito Sadahira; Kiyoshi Yoshida
Journal:  Am Heart J       Date:  2006-10       Impact factor: 4.749

9.  3D cryo-imaging: a very high-resolution view of the whole mouse.

Authors:  Debashish Roy; Grant J Steyer; Madhusudhana Gargesha; Meredith E Stone; David L Wilson
Journal:  Anat Rec (Hoboken)       Date:  2009-03       Impact factor: 2.064

10.  Automated tissue characterization of in vivo atherosclerotic plaques by intravascular optical coherence tomography images.

Authors:  Giovanni Jacopo Ughi; Tom Adriaenssens; Peter Sinnaeve; Walter Desmet; Jan D'hooge
Journal:  Biomed Opt Express       Date:  2013-06-04       Impact factor: 3.732

  10 in total
  6 in total

1.  Automated plaque characterization using deep learning on coronary intravascular optical coherence tomographic images.

Authors:  Juhwan Lee; David Prabhu; Chaitanya Kolluru; Yazan Gharaibeh; Vladislav N Zimin; Hiram G Bezerra; David L Wilson
Journal:  Biomed Opt Express       Date:  2019-11-25       Impact factor: 3.732

2.  Co-registration of pre- and post-stent intravascular OCT images for validation of finite element model simulation of stent expansion.

Authors:  Yazan Gharaibeh; Juhwan Lee; David Prabhu; Pengfei Dong; Vladislav N Zimin; Luis A Dallan; Hiram Bezerra; Linxia Gu; David Wilson
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-02-28

3.  Automatic A-line coronary plaque classification using combined deep learning and textural features in intravascular OCT images.

Authors:  Juhwan Lee; Chaitanya Kolluru; Yazan Gharaibeh; David Prabhu; Vladislav N Zimin; Hiram Bezerra; David Wilson
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-03-16

4.  Application and Evaluation of Highly Automated Software for Comprehensive Stent Analysis in Intravascular Optical Coherence Tomography.

Authors:  Hong Lu; Juhwan Lee; Martin Jakl; Zhao Wang; Pavel Cervinka; Hiram G Bezerra; David L Wilson
Journal:  Sci Rep       Date:  2020-02-07       Impact factor: 4.379

Review 5.  Research Progress of Machine Learning and Deep Learning in Intelligent Diagnosis of the Coronary Atherosclerotic Heart Disease.

Authors:  Haoxuan Lu; Yudong Yao; Li Wang; Jianing Yan; Shuangshuang Tu; Yanqing Xie; Wenming He
Journal:  Comput Math Methods Med       Date:  2022-04-26       Impact factor: 2.809

Review 6.  Artificial Intelligence in Cardiovascular Atherosclerosis Imaging.

Authors:  Jia Zhang; Ruijuan Han; Guo Shao; Bin Lv; Kai Sun
Journal:  J Pers Med       Date:  2022-03-08
  6 in total

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