Literature DB >> 29562255

Quantifying the binding stoichiometry and affinity of histo-blood group antigen oligosaccharides for human noroviruses.

Ling Han1, Ruixiang Zheng1, Michele R Richards1, Ming Tan2,3, Elena N Kitova1, Xi Jiang2,3, John S Klassen1.   

Abstract

Human noroviruses (HuNoVs) are a major cause of acute gastroenteritis. Many HuNoVs recognize histo-blood group antigens (HBGAs) as cellular receptors or attachment factors for infection. It was recently proposed that HuNoV recognition of HBGAs involves a cooperative, multistep binding mechanism that exploits both known and previously unknown glycan binding sites. In this study, binding measurements, implemented using electrospray ionization mass spectrometry (ESI-MS) were performed on homodimers of the protruding domain (P dimers) of the capsid protein of three HuNoV strains [Saga (GII.4), Vietnam 026 (GII.10) and VA387 (GII.4)] with the ethyl glycoside of the B trisaccharide (α-d-Gal-(1→3)-[α-l-Fuc-(1→2)]-β-d-Gal-OC2H5) and free B type 1 tetrasaccharide (α-d-Gal-(1→3)-[α-l-Fuc-(1→2)]-β-d-Gal-(1→3)-d-GlcNAc) in an effort to confirm the existence of new HBGA binding sites. After correcting the mass spectra for nonspecific interactions that form in ESI droplets as they evaporate to dryness, all three P dimers were found to bind a maximum of two B trisaccharides at the highest concentrations investigated. The apparent affinities measured for stepwise binding of B trisaccharide suggest positive cooperativity. Similar results were obtained for B type 1 tetrasaccharide binding to Saga P dimer. Based on these results, it is proposed that HuNoV P dimers possess only two HBGA binding sites. It is also shown that nonspecific binding corrections applied to mass spectra acquired using energetic ion source conditions that promote in-source dissociation can lead to apparent HuNoV-HBGA oligosaccharide binding stoichiometries and affinities that are artificially high. Finally, evidence that high concentrations of oligosaccharide can induce conformational changes in HuNoV P dimers is presented.

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Year:  2018        PMID: 29562255      PMCID: PMC6676958          DOI: 10.1093/glycob/cwy028

Source DB:  PubMed          Journal:  Glycobiology        ISSN: 0959-6658            Impact factor:   4.313


  6 in total

1.  Sialic acid-containing glycolipids mediate binding and viral entry of SARS-CoV-2.

Authors:  Linh Nguyen; Kelli A McCord; Duong T Bui; Kim M Bouwman; Elena N Kitova; Mohamed Elaish; Dhanraj Kumawat; Gour C Daskhan; Ilhan Tomris; Ling Han; Pradeep Chopra; Tzu-Jing Yang; Steven D Willows; Andrew L Mason; Lara K Mahal; Todd L Lowary; Lori J West; Shang-Te Danny Hsu; Tom Hobman; Stephen M Tompkins; Geert-Jan Boons; Robert P de Vries; Matthew S Macauley; John S Klassen
Journal:  Nat Chem Biol       Date:  2021-11-09       Impact factor: 15.040

2.  A quantitative, high-throughput method identifies protein-glycan interactions via mass spectrometry.

Authors:  Pavel I Kitov; Elena N Kitova; Ling Han; Zhixiong Li; Jaesoo Jung; Emily Rodrigues; Carmanah D Hunter; Christopher W Cairo; Matthew S Macauley; John S Klassen
Journal:  Commun Biol       Date:  2019-07-22

3.  LILBID laser dissociation curves: a mass spectrometry-based method for the quantitative assessment of dsDNA binding affinities.

Authors:  Phoebe Young; Genia Hense; Carina Immer; Jens Wöhnert; Nina Morgner
Journal:  Sci Rep       Date:  2020-11-23       Impact factor: 4.379

4.  Glycan-Induced Protein Dynamics in Human Norovirus P Dimers Depend on Virus Strain and Deamidation Status.

Authors:  Jasmin Dülfer; Hao Yan; Maxim N Brodmerkel; Robert Creutznacher; Alvaro Mallagaray; Thomas Peters; Carl Caleman; Erik G Marklund; Charlotte Uetrecht
Journal:  Molecules       Date:  2021-04-07       Impact factor: 4.411

5.  Norovirus-glycan interactions - how strong are they really?

Authors:  Thomas Peters; Robert Creutznacher; Thorben Maass; Alvaro Mallagaray; Patrick Ogrissek; Stefan Taube; Lars Thiede; Charlotte Uetrecht
Journal:  Biochem Soc Trans       Date:  2022-02-28       Impact factor: 4.919

6.  NMR Experiments Shed New Light on Glycan Recognition by Human and Murine Norovirus Capsid Proteins.

Authors:  Robert Creutznacher; Thorben Maass; Patrick Ogrissek; Georg Wallmann; Clara Feldmann; Hannelore Peters; Marit Lingemann; Stefan Taube; Thomas Peters; Alvaro Mallagaray
Journal:  Viruses       Date:  2021-03-05       Impact factor: 5.048

  6 in total

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