| Literature DB >> 29561779 |
Yuki Yamashita1, Nanoha Suzuki1, Nana Hirose1, Katsuhiro Kojima2, Wakako Tsugawa3, Koji Sode4,5,6.
Abstract
The FAD-dependent glucose dehydrogenase from Burkholderia cepacia (FADGDH) is a hetero-oligomeric enzyme that is capable of direct electron transfer (DET) with an electrode. The cytochrome c (cyt c) subunit, which possesses three hemes (heme 1, heme 2, and heme 3, from the N-terminal sequence), is known to enable DET; however, details of the electron transfer pathway remain unknown. A mutagenesis investigation of the heme axial ligands was carried out to elucidate the electron transfer pathway to the electron mediators and/or the electrode. The sixth axial ligand for each of the three heme irons, Met109, Met263, and Met386 were substituted with His. The catalytic activities of the wild-type (WT) and mutant enzymes were compared by investigating their dye-mediated dehydrogenase activities and their DET abilities toward the electrode. The results suggested that (1) heme 1 with Met109 as an axial ligand is mainly responsible for the electron transfer with electron acceptors in the solution, but not for the DET with the electrode; (2) heme 2 with Met263 is responsible for the DET-type reaction with the electrode; and (3) heme 3 with Met386 seemed to be the electron acceptor from the catalytic subunit. From these results, two electron transfer pathways were proposed depending on the electron acceptors. Electrons are transferred from the catalytic subunit to heme 3, then to heme 2, to heme 1 and, finally, to electron acceptors in solution. However, if the enzyme complex is immobilized on the electrode and is used as electron acceptors, electrons are passed to the electrode from heme 2.Entities:
Keywords: biomedical engineering; cytochrome c; direct electron transfer; glucose dehydrogenase; glucose sensor
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Year: 2018 PMID: 29561779 PMCID: PMC5979317 DOI: 10.3390/ijms19040931
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Primary structural alignment of the cyt c subunits of hetero-oligomeric dehydrogenases. The aligned sequences were cyt c subunits of; FADGDH: FADGDH from Burkholderia cepacia (GenBank accession no. AAQ06608), FDH: fructose dehydrogenase from Gluconobacter japonicas (GenBank accession no. BAM93251), 2KGDH: 2-ketogluconate dehydrogenase from Gluconobacter japonicas (GenBank accession no. BAQ21464), SDH: sorbitol dehydrogenase from Gluconobacter frateurii (GenBank accession no. BAD60914), and GADH: gluconate dehydrogenase from Pantoea cypripedii (GenBank accession no. AAC45884). These sequences were aligned and analyzed using Clustal Omega software [13]. The conserved Cys-Xaa-Xaa-Cys-His motifs are indicated by a black bar. The target Met residues (Met109, Met263, and Met386) are indicated by black arrows.
Figure 2The dye-mediated dehydrogenase activities of WT and mutant FADGDHs. The activities were measured using either (a) 2-hexaammineruthenium(III) chloride (Ru-MTT) or (b) PMS (PMS-DCPIP) as an electron acceptor. Figure 2c,d are the comparison of Vmax values for WT and mutant FADGDHs using either (c) 2-hexaammineruthenium(III) chloride (Ru-MTT) or (d) PMS (PMS-DCPIP) as an electron acceptor.
Figure 3DET-type catalytic current measurement of the (a) WT; or mutant FADGDH (b) Met109His; (c) Met263His; and (d) Met386His-immobilized gold electrode. Buffer: 100 mM PPB (pH 7.0), 37 °C. Reference electrode: Ag/AgCl; counter electrode: Pt wire. Applied potential: +400, +250, +100, and +50 mV vs. Ag/AgCl.
Figure 4Imax value dependency on the applied potential vs. Ag/AgCl for the electrode immobilized with WT, Met109His, Met263His, or Met386His enzyme.
Figure 5Schematic of the proposed electron transfer pathway of FADGDH. (a) Electron acceptors in a dye-mediated dehydrogenase activity assay in a solution; and (b) DET-type electron transfer to the electrode.