| Literature DB >> 29560240 |
Mala A Sainna1, Suresh Kumar2, Devesh Kumar2, Simonetta Fornarini3, Maria Elisa Crestoni3, Sam P de Visser1.
Abstract
Cytochrome P450 enzymes are heme based monoxygenases that catalyse a range of oxygen atom transfer reactions with various substrates, including aliphatic and aromatic hydroxylation as well as epoxidation reactions. The active species is short-lived and difficult to trap and characterize experimentally, moreover, it reacts in a regioselective manner with substrates leading to aliphatic hydroxylation and epoxidation products, but the origin of this regioselectivity is poorly understood. We have synthesized a model complex and studied it with low-pressure Fourier transform-ion cyclotron resonance (FT-ICR) mass spectrometry (MS). A novel approach was devised using the reaction of [FeIII(TPFPP)]+ (TPFPP = meso-tetrakis(pentafluorophenyl)porphinato dianion) with iodosylbenzene as a terminal oxidant which leads to the production of ions corresponding to [FeIV(O)(TPFPP+˙)]+. This species was isolated in the gas-phase and studied in its reactivity with a variety of olefins. Product patterns and rate constants under Ideal Gas conditions were determined by FT-ICR MS. All substrates react with [FeIV(O)(TPFPP+˙)]+ by a more or less efficient oxygen atom transfer process. In addition, substrates with low ionization energies react by a charge-transfer channel, which enabled us to determine the electron affinity of [FeIV(O)(TPFPP+˙)]+ for the first time. Interestingly, no hydrogen atom abstraction pathways are observed for the reaction of [FeIV(O)(TPFPP+˙)]+ with prototypical olefins such as propene, cyclohexene and cyclohexadiene and also no kinetic isotope effect in the reaction rate is found, which suggests that the competition between epoxidation and hydroxylation - in the gas-phase - is in favour of substrate epoxidation. This notion further implies that P450 enzymes will need to adapt their substrate binding pocket, in order to enable favourable aliphatic hydroxylation over double bond epoxidation pathways. The MS studies yield a large test-set of experimental reaction rates of iron(iv)-oxo porphyrin cation radical complexes, so far unprecedented in the gas-phase, providing a benchmark for calibration studies using computational techniques. Preliminary computational results presented here confirm the observed trends excellently and rationalize the reactivities within the framework of thermochemical considerations and valence bond schemes.Entities:
Year: 2014 PMID: 29560240 PMCID: PMC5811088 DOI: 10.1039/c4sc02717e
Source DB: PubMed Journal: Chem Sci ISSN: 2041-6520 Impact factor: 9.825
Fig. 1Active site of P450 as taken from the 2WM4 pdb file. Substrate tyramine is highlighted in orange.
Scheme 1Models investigated in this work.
Scheme 2Substrates investigated in this work.
Kinetic data and product distributions obtained for the gas phase reaction of [FeIV(O)(TPFPP+˙)]+ with selected olefins as determined by FT-ICR MS
| Substrate | IE |
|
|
| HT | CT | OAT | Add |
| Ethene | 10.51 | 8.5 × 10–5 | 8.5 | 1 × 10–3 | — | — | 100 | — |
| Propene | 9.73 | 7.6 × 10–3 | 9.45 | 0.080 | — | — | 100 | — |
| 1-Butene | 9.55 | 0.029 | 9.6 | 0.30 | — | — | 100 | — |
|
| 9.10 | 0.080 | 10.8 | 0.74 | — | — | 100 | — |
| 2,3-Dimethyl-1-butene | 9.07 | 0.145 | 9.5 | 1.5 | — | — | 100 | — |
| Cyclohexene | 8.95 | 0.194–0.291 | 9.7 | 2–3 | — | — | 75 | 25 |
| 1,4-Cyclohexadiene | 8.82 | 0.511 | 9.29 | 5.5 | — | — | 90 | 10 |
| 2-Methoxy-1-propene | 8.64 | 0.819 | 10.5 | 7.8 | — | — | 100 | — |
| 1,3-Pentadiene | 8.60 | 0.826 | 9.6 | 8.6 | — | — | 100 | — |
| Styrene | 8.46 | 1.40 | 9.26 | 15 | — | — | 100 | — |
| 1,3-Cyclohexadiene | 8.25 | 1.58 | 9.29 | 17 | — | — | 100 | — |
|
| 8.1–8.2 | 2.97 | 11.9 | 25 | 4 | — | 96 | — |
| Indene | 8.14 | 3.18 | 8.6 | 37 | 2 | 12 | 86 | — |
| β-Pinene | N/A | 4.32–4.7 | 9.4 | 46–50 | — | — | 100 | — |
Ionization energies (IE, eV) are from ref. 24. N/A stands for not available.
Second-order rate constants (kexp) in units of 10–10 cm3 molecule–1 s–1 are measured at a temperature of 300 K in the FT-ICR cell. The estimated error in kexp is ±30%, although the internal consistency of the data is within ±10%.
Collision rate constants (kADO) evaluated with the parameterized trajectory theory.
Reaction efficiency (%), Φ = kexp/kADO × 100.
The reaction with cyclohexene-d10 gave a rate constant within experimental error of that for cyclohexene-h10.
The IE for α-pinene is 8.07 eV.
Scheme 3Pathways observed for the reaction of [FeIV(O)(TPFPP+˙)]+ ions (R = C6F5) with selected substrates (Sub) as studied with FT-ICR MS.
Fig. 2Time dependence of relative ion abundancies for the reaction of [FeIV(O)(TPFPP+˙)]+ (m/z 1044) with indene. Product ions are [FeIII(TPFPP)]+ (m/z 1028), [Fe(TPFPP)(C9H8)O]+ (m/z 1160) and C9H8+˙ (m/z 116). Experiments were performed in the presence of indene at 5.2 × 10–8 mbar in the FT-ICR cell.
Fig. 3Molecular valence orbitals of 4A.
Relative energies of several low-lying electronic states of [Fe(O)(Por+˙)]+ (A)
| State | Configuration |
|
|
|
| Δ | Δ | Δ | ||
| 2A1u | δ2 π* | 0.00 | 0.00 | 0.00 |
| 4A1u | δ2 π* | 0.71 | 0.19 | 0.21 |
| 2A2u | δ2 π* | 1.65 | 3.75 | 3.80 |
| 4A2u | δ2 π* | 1.25 | 3.42 | 3.47 |
| 6A2u | δ↑ π* | 9.25 | 18.68 | 19.38 |
|
4Δ | δ↑ π* | 9.69 | ND | ND |
|
4Δ | δ↑ π* | 19.53 | ND | ND |
Relative energies in kcal mol–1 with respect to the 2A1u state, ND stands for not determined.
Energies obtained at UB3LYP/BS2//UB3LYP/BS1 level of theory.
Energies and geometries calculated at UB3LYP/BS2 level of theory.
Energies and geometries calculated at UB3LYP-D3/BS2 level of theory.
Fig. 4Optimized geometries of the 4,2A2u and 4,2A1u states of 4,2A as calculated with UB3LYP/BS1 [UB3LYP/BS2] {UB3LYP-D3/BS2} with Fe–O bond lengths in angstroms.
Fig. 5UB3LYP/BS1 optimized geometries of epoxidation transition states with bond lengths in angstroms.
Fig. 6Correlation between experimental and computational barrier heights.
Fig. 7(a) Correlation between experimentally determined RT ln kexp (for raw data, see Table 1) versus known ionization energies (IE). (b) Correlation between calculated epoxidation activation enthalpy (in kcal mol–1) and experimental ionization energy for the substrates in Fig. 5.
Fig. 8VB curve crossing diagram for the C–O bond formation step in olefin epoxidation (R2CCH2) by [FeIV(O)(TPFPP+˙)]+. Valence electrons are identified with a dot and lines (curved and straight) in the VB structures represent bonds.
Fig. 9Correlation between calculated epoxidation activation enthalpy (in kcal mol–1) and BDECH for the substrates.