Literature DB >> 29559738

A genome-wide association study on photic sneeze syndrome in a Japanese population.

Daimei Sasayama1,2, Shinya Asano3, Shun Nogawa3, Shoko Takahashi3, Kenji Saito3, Hiroshi Kunugi4.   

Abstract

Photic sneeze syndrome (PSS) is characterized by a tendency to sneeze when the eye is exposed to bright light. Recent genome-wide association studies (GWASs) have identified single-nucleotide polymorphisms (SNPs) associated with PSS in Caucasian populations. We performed a GWAS on PSS in Japanese individuals who responded to a web-based survey and provided saliva samples. After quality control, genotype data of 210,086 SNPs in 11,409 individuals were analyzed. The overall prevalence of PSS was 3.2%. Consistent with previous reports, SNPs at 3p12.1 were associated with PSS at genome-wide significance (p < 5.0 × 10-8). Furthermore, two novel loci at 9q34.2 and 4q35.2 reached suggestive significance (p < 5.0 × 10-6). Our data also provided evidence supporting the two additional SNPs on 2q22.3 and 9q33.2 reportedly associated with PSS. Our study reproduced previous findings in Caucasian populations and further suggested novel PSS loci in the Japanese population.

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Year:  2018        PMID: 29559738     DOI: 10.1038/s10038-018-0441-z

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  14 in total

1.  SNEEZING IN RESPONSE TO LIGHT.

Authors:  H C EVERETT
Journal:  Neurology       Date:  1964-05       Impact factor: 9.910

2.  LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants.

Authors:  Mitchell J Machiela; Stephen J Chanock
Journal:  Bioinformatics       Date:  2015-07-02       Impact factor: 6.937

3.  A curious fact: Photic sneeze reflex. Autosomical dominant compelling helio-ophthalmic outburst syndrome.

Authors:  C Sevillano; A Parafita-Fernández; V Rodriguez-Lopez; M Sampil; N Moraña; E Viso; F J Cores
Journal:  Arch Soc Esp Oftalmol       Date:  2016-02-17

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Authors:  R A Breitenbach; P K Swisher; M K Kim; B S Patel
Journal:  Mil Med       Date:  1993-12       Impact factor: 1.437

5.  Genome-wide quantitative trait loci mapping of the human cerebrospinal fluid proteome.

Authors:  Daimei Sasayama; Kotaro Hattori; Shintaro Ogawa; Yuuki Yokota; Ryo Matsumura; Toshiya Teraishi; Hiroaki Hori; Miho Ota; Sumiko Yoshida; Hiroshi Kunugi
Journal:  Hum Mol Genet       Date:  2017-01-01       Impact factor: 6.150

6.  Web-based, participant-driven studies yield novel genetic associations for common traits.

Authors:  Nicholas Eriksson; J Michael Macpherson; Joyce Y Tung; Lawrence S Hon; Brian Naughton; Serge Saxonov; Linda Avey; Anne Wojcicki; Itsik Pe'er; Joanna Mountain
Journal:  PLoS Genet       Date:  2010-06-24       Impact factor: 5.917

7.  Trait-associated SNPs are more likely to be eQTLs: annotation to enhance discovery from GWAS.

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Journal:  PLoS Genet       Date:  2010-04-01       Impact factor: 5.917

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Authors:  Chen-Hsin Yu; Lipika R Pal; John Moult
Journal:  OMICS       Date:  2016-07

9.  An integrated map of genetic variation from 1,092 human genomes.

Authors:  Goncalo R Abecasis; Adam Auton; Lisa D Brooks; Mark A DePristo; Richard M Durbin; Robert E Handsaker; Hyun Min Kang; Gabor T Marth; Gil A McVean
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

10.  Genetic effects on gene expression across human tissues.

Authors:  Alexis Battle; Christopher D Brown; Barbara E Engelhardt; Stephen B Montgomery
Journal:  Nature       Date:  2017-10-11       Impact factor: 49.962

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  1 in total

1.  A genome-wide association study on photic sneeze reflex in the Chinese population.

Authors:  Mengqiao Wang; Xinghan Sun; Yang Shi; Xiaojun Song; Hao Mi
Journal:  Sci Rep       Date:  2019-03-21       Impact factor: 4.379

  1 in total

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