| Literature DB >> 29556202 |
Qi Wang1, Qian Wang1,2, Yan-Le Zhou1,3, Shuang Shan1, Huan-Huan Cui1, Yong Xiao1, Kun Dong1, Adel Khashaveh1, Liang Sun4, Yong-Jun Zhang1.
Abstract
The phytophagous mirid bugs of Apolygus lucorum, Lygus pratensis as well as three Adelphocoris spp., including Adelphocoris lineolatus, A. suturalis, and A. fasciaticollis are major pests of multiple agricultural crops in China, which have distinct geographical distribution and occurrence ranges. Like many insect species, these bugs heavily rely on olfactory cues to search preferred host plants, thereby investigation on functional co-evolution and divergence of olfactory genes seems to be necessary and is of great interest. In the odorant detection pathway, olfactory receptor co-receptor (Orco) plays critical role in the perception of odors. In this study, we identified the full-length cDNA sequences encoding three putative Orcos (AsutOrco, AfasOrco, and LpraOrco) in bug species of A. suturalis, A. fasciaticollis, and L. pratensis based on homology cloning method. Next, sequence alignment, membrane topology and gene structure analysis showed that these three Orco orthologs together with previously reported AlinOrco and AlucOrco shared high amino acid identities and similar topology structure, but had different gene structure especially at the length and insertion sites of introns. Furthermore, the evolutional estimation on the ratios of non-synonymous to synonymous (Ka/Ks) revealed that Orco genes were under strong purifying selection, but the degrees of variation were significant different between genera. The results of quantitative real-time PCR experiments showed that these five Orco genes had a similar antennae-biased tissue expression pattern. Taking these data together, it is thought that Orco genes in the mirid species could share conserved olfaction roles but had different evolution rates. These findings would lay a foundation to further investigate the molecular mechanisms of evolutionary interactions between mirid bugs and their host plants, which might in turn contribute to the development of pest management strategy for mirid bugs.Entities:
Keywords: evolution analysis; gene structure; mirid bugs; olfactory receptor co-receptor; sequence analysis
Year: 2018 PMID: 29556202 PMCID: PMC5845112 DOI: 10.3389/fphys.2018.00158
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
Figure 1Sequence alignment of Orcos from five mirid bug species. Amino acid sequences are aligned by ClustalX 2.1 and edited by GeneDoc 2.7.0 software; the predicted positions of seven putative transmembrane domains (TM1-7) are marked with red transverse line.
Figure 2Gene structure and intron insertion loci of five Orcos. (A) Location of extrons (orange rectangles) and introns (blue line) in different Orco genes. (B) Insertion loci labeled using black triangle of different introns in Orco sequence.
Figure 3Neighbor joining tree of Orcos from different insect species. (A) Phylogenetic tree of Orcos from seven bug species. (B) Phylogenetic relationships among seven species constructed using species-specific cytochrome oxidase subunit I (COI). (C) Phylogenetic tree of insect Orcos from different orders. Yellow triangle, Coleoptera; Red triangle, Hymenoptera; Dark blue solid diamond, Diptera; Dark green solid square, Lepidoptera; Black solid circle, Hemiptera; Light blue hollow circle, Orthoptera; Light blue hollow diamond, Blattaria; Light red hollow circle, Anoplura.
The ratio of non-synonymous to synonymous substitutions of Orco genes in five orders.
| AlucOrco | ||||||||||||||
| AlinOrco | 0.2636 | |||||||||||||
| AsutOrco | 0.2790 | 0.5936 | ||||||||||||
| AfasOrco | 0.2699 | 0.4948 | 0.7443 | |||||||||||
| LpraOrco | 0.2198 | 0.2263 | 0.2458 | 0.2373 | ||||||||||
| LlinOrco | 0.2351 | 0.2194 | 0.2388 | 0.2302 | 0.1502 | |||||||||
| LhesOrco | 0.2351 | 0.2194 | 0.2388 | 0.2302 | 0.1502 | 0 | ||||||||
| AaegOrco | ||||||||||||||
| AgamOrco | 0.3013 | |||||||||||||
| DmelOrco | 0.3229 | 0.3457 | ||||||||||||
| HarmOrco | 0.4372 | 0.4216 | 0.3562 | |||||||||||
| BmorOrco | 0.3859 | 0.3869 | 0.2947 | 0.2981 | ||||||||||
| AmelOrco | 0.4414 | 0.4686 | 0.4117 | 0.4979 | 0.4154 | |||||||||
| MmedOrco | 0.3678 | 0.3464 | 0.3343 | 0.3248 | 0.3524 | 0.2948 |
Estimations of synonymous substitutions and non-synonymous divergences were computed according to Modified Nei-Gojobori method (Jukes-Cantor). The ratios of non-synonymous to non-synonymous substitutions are listed in the table. Estimates in bold represented the ratio between species of other orders and mirid bugs.
Figure 4Orco expressions in different tissues of five mirid bug species. The error bars represent standard error, and different letters above each bar denote significant differences (P < 0.05).