Literature DB >> 29554367

Perspectives on Machine Learning for Classification of Schizotypy Using fMRI Data.

Kristoffer H Madsen1,2, Laerke G Krohne1,2, Xin-Lu Cai3, Yi Wang3,4,5, Raymond C K Chan3,4,5.   

Abstract

Functional magnetic resonance imaging is capable of estimating functional activation and connectivity in the human brain, and lately there has been increased interest in the use of these functional modalities combined with machine learning for identification of psychiatric traits. While these methods bear great potential for early diagnosis and better understanding of disease processes, there are wide ranges of processing choices and pitfalls that may severely hamper interpretation and generalization performance unless carefully considered. In this perspective article, we aim to motivate the use of machine learning schizotypy research. To this end, we describe common data processing steps while commenting on best practices and procedures. First, we introduce the important role of schizotypy to motivate the importance of reliable classification, and summarize existing machine learning literature on schizotypy. Then, we describe procedures for extraction of features based on fMRI data, including statistical parametric mapping, parcellation, complex network analysis, and decomposition methods, as well as classification with a special focus on support vector classification and deep learning. We provide more detailed descriptions and software as supplementary material. Finally, we present current challenges in machine learning for classification of schizotypy and comment on future trends and perspectives.

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Year:  2018        PMID: 29554367      PMCID: PMC6188516          DOI: 10.1093/schbul/sby026

Source DB:  PubMed          Journal:  Schizophr Bull        ISSN: 0586-7614            Impact factor:   9.306


  84 in total

1.  On clustering fMRI time series.

Authors:  C Goutte; P Toft; E Rostrup; F Nielsen; L K Hansen
Journal:  Neuroimage       Date:  1999-03       Impact factor: 6.556

2.  Disease prediction in the at-risk mental state for psychosis using neuroanatomical biomarkers: results from the FePsy study.

Authors:  Nikolaos Koutsouleris; Stefan Borgwardt; Eva M Meisenzahl; Ronald Bottlender; Hans-Jürgen Möller; Anita Riecher-Rössler
Journal:  Schizophr Bull       Date:  2011-11-10       Impact factor: 9.306

3.  Comparing classification methods for longitudinal fMRI studies.

Authors:  Tanya Schmah; Grigori Yourganov; Richard S Zemel; Geoffrey E Hinton; Steven L Small; Stephen C Strother
Journal:  Neural Comput       Date:  2010-11       Impact factor: 2.026

4.  Classification of functional brain images with a spatio-temporal dissimilarity map.

Authors:  Svetlana V Shinkareva; Hernando C Ombao; Bradley P Sutton; Aprajita Mohanty; Gregory A Miller
Journal:  Neuroimage       Date:  2006-08-14       Impact factor: 6.556

5.  PRoNTo: pattern recognition for neuroimaging toolbox.

Authors:  J Schrouff; M J Rosa; J M Rondina; A F Marquand; C Chu; J Ashburner; C Phillips; J Richiardi; J Mourão-Miranda
Journal:  Neuroinformatics       Date:  2013-07

6.  Exploratory study on the base-rate of paranoid ideation in a non-clinical Chinese sample.

Authors:  Raymond C K Chan; Xiaoyan Li; Man-kin Lai; Huanhuan Li; Ya Wang; Jifang Cui; Yongyu Deng; Adrian Raine
Journal:  Psychiatry Res       Date:  2010-05-26       Impact factor: 3.222

7.  Schizotypy and brain structure: a voxel-based morphometry study.

Authors:  G Modinos; A Mechelli; J Ormel; N A Groenewold; A Aleman; P K McGuire
Journal:  Psychol Med       Date:  2009-11-17       Impact factor: 7.723

Review 8.  FSL.

Authors:  Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith
Journal:  Neuroimage       Date:  2011-09-16       Impact factor: 6.556

9.  Dimensional schizotypy and social cognition: an fMRI imaging study.

Authors:  Yi Wang; Wen-Hua Liu; Zhi Li; Xin-Hua Wei; Xin-Qing Jiang; David L Neumann; David H K Shum; Eric F C Cheung; Raymond C K Chan
Journal:  Front Behav Neurosci       Date:  2015-05-27       Impact factor: 3.558

10.  Deep learning for neuroimaging: a validation study.

Authors:  Sergey M Plis; Devon R Hjelm; Ruslan Salakhutdinov; Elena A Allen; Henry J Bockholt; Jeffrey D Long; Hans J Johnson; Jane S Paulsen; Jessica A Turner; Vince D Calhoun
Journal:  Front Neurosci       Date:  2014-08-20       Impact factor: 4.677

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  3 in total

1.  Classification of social anhedonia using temporal and spatial network features from a social cognition fMRI task.

Authors:  Laerke Gebser Krohne; Yi Wang; Jesper L Hinrich; Morten Moerup; Raymond C K Chan; Kristoffer H Madsen
Journal:  Hum Brain Mapp       Date:  2019-08-12       Impact factor: 5.038

2.  Bridging the Brain and Data Sciences.

Authors:  John Darrell Van Horn
Journal:  Big Data       Date:  2020-11-18       Impact factor: 4.426

3.  Generalizability of machine learning for classification of schizophrenia based on resting-state functional MRI data.

Authors:  Xin-Lu Cai; Dong-Jie Xie; Kristoffer H Madsen; Yong-Ming Wang; Sophie Alida Bögemann; Eric F C Cheung; Arne Møller; Raymond C K Chan
Journal:  Hum Brain Mapp       Date:  2019-10-01       Impact factor: 5.038

  3 in total

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