Literature DB >> 29552390

Imaging of pre-mRNA splicing in living subjects using a genetically encoded luciferase reporter.

Yaru Shi1,2, Wei Liu3,2, Haifeng Zheng1, Zhiqiang Li1, Xiaorui Shi1, Shixuan Cai1, Zhiqiang Jiao1, Wenjie Mao1, Jinrong Xie1, Jie Tian1,4,5, Fu Wang1.   

Abstract

Pre-mRNA splicing is an essential step in gene expression in most eukaryote genes. Here we present the feasibility of a genetically encoded luciferase reporter to monitor the pre-mRNA splicing process in living cells and animals. We showed that the splicing activity change induced by isoginkgetin could be readily visualized in vitro both in a dose and time dependent manner. Moreover, the pre-mRNA splicing process could be also obviously detected in mice by bioluminescence imaging and confirmed by RT-PCR. Our work provided a reporter system that allows high-throughput screening of chemical libraries to identify potential compounds leading to aberrant patterns of splicing.

Entities:  

Keywords:  (170.0170) Medical optics and biotechnology; (170.3880) Medical and biological imaging; (170.6280) Spectroscopy, fluorescence and luminescence

Year:  2018        PMID: 29552390      PMCID: PMC5854055          DOI: 10.1364/BOE.9.000518

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  25 in total

1.  Molecular imaging of gene expression in living subjects by spliceosome-mediated RNA trans-splicing.

Authors:  S Bhaumik; Z Walls; M Puttaraju; L G Mitchell; S S Gambhir
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-25       Impact factor: 11.205

2.  Detection of mRNA in mammalian cells with a split ribozyme reporter.

Authors:  Sumitaka Hasegawa; Gayatri Gowrishankar; Jianghong Rao
Journal:  Chembiochem       Date:  2006-06       Impact factor: 3.164

Review 3.  Transcription mechanisms.

Authors:  T Keith Blackwell; Amy K Walker
Journal:  WormBook       Date:  2006-09-05

Review 4.  The spliceosome: design principles of a dynamic RNP machine.

Authors:  Markus C Wahl; Cindy L Will; Reinhard Lührmann
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

5.  A generalizable strategy for imaging pre-mRNA levels in living subjects using spliceosome-mediated RNA trans-splicing.

Authors:  Zachary F Walls; M Puttaraju; Gary F Temple; Sanjiv S Gambhir
Journal:  J Nucl Med       Date:  2008-06-13       Impact factor: 10.057

6.  Ribozyme-mediated repair of defective mRNA by targeted, trans-splicing.

Authors:  B A Sullenger; T R Cech
Journal:  Nature       Date:  1994-10-13       Impact factor: 49.962

7.  A double-reporter splicing assay for determining splicing efficiency in mammalian cells.

Authors:  Md Talat Nasim; Ian C Eperon
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

8.  Molecular imaging of atherosclerotic plaques with technetium-99m-labelled antisense oligonucleotides.

Authors:  Guangming Qin; Yongxue Zhang; Wei Cao; Rui An; Zairong Gao; Guiling Li; Wendai Xu; Kaijun Zhang; Shuren Li
Journal:  Eur J Nucl Med Mol Imaging       Date:  2004-11-26       Impact factor: 9.236

9.  Normal and mutant human beta-globin pre-mRNAs are faithfully and efficiently spliced in vitro.

Authors:  A R Krainer; T Maniatis; B Ruskin; M R Green
Journal:  Cell       Date:  1984-04       Impact factor: 41.582

10.  The biflavonoid isoginkgetin is a general inhibitor of Pre-mRNA splicing.

Authors:  Kristine O'Brien; Arianne J Matlin; April M Lowell; Melissa J Moore
Journal:  J Biol Chem       Date:  2008-09-30       Impact factor: 5.157

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  3 in total

1.  Prediction of drug efficacy from transcriptional profiles with deep learning.

Authors:  Jie Zhu; Jingxiang Wang; Xin Wang; Mingjing Gao; Bingbing Guo; Miaomiao Gao; Jiarui Liu; Yanqiu Yu; Liang Wang; Weikaixin Kong; Yongpan An; Zurui Liu; Xinpei Sun; Zhuo Huang; Hong Zhou; Ning Zhang; Ruimao Zheng; Zhengwei Xie
Journal:  Nat Biotechnol       Date:  2021-06-17       Impact factor: 54.908

2.  Rational Design of an Activatable Reporter for Quantitative Imaging of RNA Aberrant Splicing In Vivo.

Authors:  Jinrong Xie; Haifeng Zheng; Si Chen; Xiaorui Shi; Wenjie Mao; Fu Wang
Journal:  Mol Ther Methods Clin Dev       Date:  2020-04-18       Impact factor: 6.698

3.  Ex Vivo Modeling of Human Neuroendocrine Tumors in Tissue Surrogates.

Authors:  Brendon Herring; Samuel Jang; Jason Whitt; Kayla Goliwas; Zviadi Aburjania; Vikas Dudeja; Bin Ren; Joel Berry; James Bibb; Andra Frost; Herbert Chen; John Bart Rose; Renata Jaskula-Sztul
Journal:  Front Endocrinol (Lausanne)       Date:  2021-12-23       Impact factor: 5.555

  3 in total

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