Literature DB >> 29542146

FLOW CYTOMETRY AND THE SINGLE CELL IN PHYCOLOGY.

Jackie L Collier1.   

Abstract

Flow cytometers measure light scattering and fluorescence characteristics from individual particles in a fluid stream as they cross one or more light beams at rates of up to thousands of events per second. Flow cytometrically detectable optical signals may arise naturally from algae, reflecting cell size, structure, and endogenous pigmentation, or may be generated by fluorescent stains that report the presence of otherwise undetected cellular constituents. Some flow cytometers can physically sort particles with desired optical characteristics out of the flow stream and collect them for subsequent culture or other analyses. The statistically rigorous, cell-level perspective provided by flow cytometry has been advantageous in experimental investigations of phycological problems, such as the regulation of cell cycle progression. The capacity of flow cytometry to measure large numbers of cells in large numbers of samples rapidly and quantitatively has been used extensively by biological oceanographers to define the distributions and dynamics of marine picophytoplankton. Recent work has shown that flow cytometry can be used to elucidate relationships between the optical properties of individual cells and the bulk optical properties of the water they live in, and thereby may provide an explicit link between algal physiology and global biogeochemistry. Unfortunately, commercially available flow cytometers that are optimized for biomedical applications have a limited capacity to analyze larger phytoplankton. To circumvent these limitations, many investigators are developing flow cytometers specifically designed for analyzing the broad range of sizes, shapes, and pigments found among algae. These new instruments can perform some novel measurements, including simple fluorescence excitation spectra, detailed angular scattering measurements, and in-flow digital imaging. The growing accessibility and power of flow cytometers may allow the technology to be applied to a wider array of problems in phycology, including investigations of nonplanktonic and multicellular algae, but also presents new challenges for effectively analyzing the large quantity of multiparameter data produced. Ultimately, the detection of molecular probes by flow cytometry may allow single-cell taxonomic and physiological information to be garnered for a variety of algae, both in culture and in nature.

Entities:  

Keywords:  flow cytometer; fluorescence; light scatter; molecular probes; photosynthesis; phytoplankton; pigments

Year:  2000        PMID: 29542146     DOI: 10.1046/j.1529-8817.2000.99215.x

Source DB:  PubMed          Journal:  J Phycol        ISSN: 0022-3646            Impact factor:   2.923


  8 in total

1.  Quantitative assessment of picoeukaryotes in the natural environment by using taxon-specific oligonucleotide probes in association with tyramide signal amplification-fluorescence in situ hybridization and flow cytometry.

Authors:  Isabelle C Biegala; Fabrice Not; Daniel Vaulot; Nathalie Simon
Journal:  Appl Environ Microbiol       Date:  2003-09       Impact factor: 4.792

2.  Individual cell based traits obtained by scanning flow-cytometry show selection by biotic and abiotic environmental factors during a phytoplankton spring bloom.

Authors:  Francesco Pomati; Nathan J B Kraft; Thomas Posch; Bettina Eugster; Jukka Jokela; Bas W Ibelings
Journal:  PLoS One       Date:  2013-08-12       Impact factor: 3.240

3.  Toxicity of Nickel Oxide Nanoparticles on a Freshwater Green Algal Strain of Chlorella vulgaris.

Authors:  Abdallah Oukarroum; Wassila Zaidi; Mahshid Samadani; David Dewez
Journal:  Biomed Res Int       Date:  2017-04-04       Impact factor: 3.411

4.  Size Is the Major Determinant of Pumping Rates in Marine Sponges.

Authors:  Teresa Maria Morganti; Marta Ribes; Gitai Yahel; Rafel Coma
Journal:  Front Physiol       Date:  2019-12-11       Impact factor: 4.566

5.  Picophytoplankton dynamics in a large temperate estuary and impacts of extreme storm events.

Authors:  Ryan W Paerl; Rebecca E Venezia; Joel J Sanchez; Hans W Paerl
Journal:  Sci Rep       Date:  2020-12-16       Impact factor: 4.379

6.  Retinoic acid influences the timing and scaling of avian wing development.

Authors:  Holly Stainton; Matthew Towers
Journal:  Cell Rep       Date:  2022-01-25       Impact factor: 9.423

7.  Flow cytometry pulse width data enables rapid and sensitive estimation of biomass dry weight in the microalgae Chlamydomonas reinhardtii and Chlorella vulgaris.

Authors:  Maurizio Chioccioli; Ben Hankamer; Ian L Ross
Journal:  PLoS One       Date:  2014-05-15       Impact factor: 3.240

8.  Fluoro-electrochemical microscopy reveals group specific differential susceptibility of phytoplankton towards oxidative damage.

Authors:  Minjun Yang; Christopher Batchelor-McAuley; Lifu Chen; Yanjun Guo; Qiong Zhang; Rosalind E M Rickaby; Heather A Bouman; Richard G Compton
Journal:  Chem Sci       Date:  2019-07-16       Impact factor: 9.825

  8 in total

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