Literature DB >> 29537927

miRNA activation is an endogenous gene expression pathway.

Luis M Vaschetto1,2.   

Abstract

Transfection of small non-coding RNAs (sncRNAs) molecules has become a routine technique widely used for silencing gene expression by triggering post-transcriptional and transcriptional RNA interference (RNAi) pathways. Moreover, in the past decade, small activating (saRNA) sequences targeting promoter regions were also reported, thereby a RNA-based gene activation (RNAa) mechanism has been proposed. In this regard, Turner and colleagues recently discovered an endogenous microRNA (miRNA) which binds its promoter in order to upregulate its own expression. Interestingly, several miRNA-induced RNA activation (miRNAa) phenomena have since then been identified. My objective here is to introduce the reader into the emergent miRNAa research field, as well as bring together important discoveries about this unexplored transcriptional activation pathway.

Keywords:  Double-stranded RNAs; RNA activation; activating miRNAs; microRNA activation; small activating RNAs

Mesh:

Substances:

Year:  2018        PMID: 29537927      PMCID: PMC6152443          DOI: 10.1080/15476286.2018.1451722

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  34 in total

1.  Endogenous miRNAa: miRNA-Mediated Gene Upregulation.

Authors:  Vera Huang
Journal:  Adv Exp Med Biol       Date:  2017       Impact factor: 2.622

2.  miR-3619-5p inhibits prostate cancer cell growth by activating CDKN1A expression.

Authors:  Senmao Li; Chenghe Wang; Xiao Yu; Huanlei Wu; Jia Hu; Shaogang Wang; Zhangqun Ye
Journal:  Oncol Rep       Date:  2016-11-16       Impact factor: 3.906

3.  Ago1 Interacts with RNA polymerase II and binds to the promoters of actively transcribed genes in human cancer cells.

Authors:  Vera Huang; Jiashun Zheng; Zhongxia Qi; Ji Wang; Robert F Place; Jingwei Yu; Hao Li; Long-Cheng Li
Journal:  PLoS Genet       Date:  2013-09-26       Impact factor: 5.917

4.  Promoter RNA links transcriptional regulation of inflammatory pathway genes.

Authors:  Masayuki Matsui; Yongjun Chu; Huiying Zhang; Keith T Gagnon; Sarfraz Shaikh; Satya Kuchimanchi; Muthiah Manoharan; David R Corey; Bethany A Janowski
Journal:  Nucleic Acids Res       Date:  2013-09-02       Impact factor: 16.971

5.  Cellular microRNAs up-regulate transcription via interaction with promoter TATA-box motifs.

Authors:  Yijun Zhang; Miaomiao Fan; Xue Zhang; Feng Huang; Kang Wu; Junsong Zhang; Jun Liu; Zhuoqiong Huang; Haihua Luo; Liang Tao; Hui Zhang
Journal:  RNA       Date:  2014-10-21       Impact factor: 4.942

6.  saRNA-guided Ago2 targets the RITA complex to promoters to stimulate transcription.

Authors:  Victoria Portnoy; Szu Hua Sharon Lin; Kathy H Li; Alma Burlingame; Zheng-Hui Hu; Hao Li; Long-Cheng Li
Journal:  Cell Res       Date:  2016-02-23       Impact factor: 25.617

7.  Antisense transcripts are targets for activating small RNAs.

Authors:  Jacob C Schwartz; Scott T Younger; Ngoc-Bich Nguyen; Daniel B Hardy; Brett P Monia; David R Corey; Bethany A Janowski
Journal:  Nat Struct Mol Biol       Date:  2008-07-06       Impact factor: 15.369

8.  The IGF2 intronic miR-483 selectively enhances transcription from IGF2 fetal promoters and enhances tumorigenesis.

Authors:  Mingzhu Liu; Anna Roth; Min Yu; Robert Morris; Francesca Bersani; Miguel N Rivera; Jun Lu; Toshihiro Shioda; Shobha Vasudevan; Sridhar Ramaswamy; Shyamala Maheswaran; Sven Diederichs; Daniel A Haber
Journal:  Genes Dev       Date:  2013-12-01       Impact factor: 11.361

9.  A novel HIV-1-encoded microRNA enhances its viral replication by targeting the TATA box region.

Authors:  Yijun Zhang; Miaomiao Fan; Guannan Geng; Bingfeng Liu; Zhuoqiong Huang; Haihua Luo; Jie Zhou; Xuemin Guo; Weiping Cai; Hui Zhang
Journal:  Retrovirology       Date:  2014-03-12       Impact factor: 4.602

Review 10.  MicroRNA in Control of Gene Expression: An Overview of Nuclear Functions.

Authors:  Caterina Catalanotto; Carlo Cogoni; Giuseppe Zardo
Journal:  Int J Mol Sci       Date:  2016-10-13       Impact factor: 5.923

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  16 in total

1.  The placenta epigenome-brain axis: placental epigenomic and transcriptomic responses that preprogram cognitive impairment.

Authors:  Anastasia N Freedman; Lauren A Eaves; Julia E Rager; Noemi Gavino-Lopez; Lisa Smeester; Jacqueline Bangma; Hudson P Santos; Robert M Joseph; Karl Ck Kuban; Thomas Michael O'Shea; Rebecca C Fry
Journal:  Epigenomics       Date:  2022-09-08       Impact factor: 4.357

2.  CircFAM53B promotes the proliferation and metastasis of glioma through activating the c-MET/PI3K/AKT pathway via sponging miR-532-3p.

Authors:  Jiaping Pei; Hui Dou; Xiaozhao Deng
Journal:  Cell Cycle       Date:  2022-01-31       Impact factor: 4.534

3.  Targeting the coding sequence: opposing roles in regulating classical and non-classical MHC class I molecules by miR-16 and miR-744.

Authors:  Michael Friedrich; Christoforos K Vaxevanis; Katharina Biehl; Anja Mueller; Barbara Seliger
Journal:  J Immunother Cancer       Date:  2020-06       Impact factor: 13.751

4.  A Novel Method for Predicting Disease-Associated LncRNA-MiRNA Pairs Based on the Higher-Order Orthogonal Iteration.

Authors:  Zhanwei Xuan; Xiang Feng; Jingwen Yu; Pengyao Ping; Haochen Zhao; Xianyou Zhu; Lei Wang
Journal:  Comput Math Methods Med       Date:  2019-05-02       Impact factor: 2.238

Review 5.  MicroRNAs and Epigenetics Strategies to Reverse Breast Cancer.

Authors:  Mohammad Mijanur Rahman; Andrew C Brane; Trygve O Tollefsbol
Journal:  Cells       Date:  2019-10-08       Impact factor: 6.600

Review 6.  Enhancer RNAs: transcriptional regulators and workmates of NamiRNAs in myogenesis.

Authors:  Emmanuel Odame; Yuan Chen; Shuailong Zheng; Dinghui Dai; Bismark Kyei; Siyuan Zhan; Jiaxue Cao; Jiazhong Guo; Tao Zhong; Linjie Wang; Li Li; Hongping Zhang
Journal:  Cell Mol Biol Lett       Date:  2021-02-10       Impact factor: 5.787

Review 7.  MicroRNA-Regulated Gene Delivery Systems for Research and Therapeutic Purposes.

Authors:  Bijay Dhungel; Charmaine A Ramlogan-Steel; Jason C Steel
Journal:  Molecules       Date:  2018-06-21       Impact factor: 4.411

8.  Understanding the Modus Operandi of MicroRNA Regulatory Clusters.

Authors:  Arthur C Oliveira; Luiz A Bovolenta; Lucas Alves; Lucas Figueiredo; Amanda O Ribeiro; Vinicius F Campos; Ney Lemke; Danillo Pinhal
Journal:  Cells       Date:  2019-09-18       Impact factor: 6.600

Review 9.  miRNAs as Influencers of Cell-Cell Communication in Tumor Microenvironment.

Authors:  Ilaria Conti; Gabriele Varano; Carolina Simioni; Ilaria Laface; Daniela Milani; Erika Rimondi; Luca M Neri
Journal:  Cells       Date:  2020-01-15       Impact factor: 6.600

10.  Activating miRNA-mRNA network in gemcitabine-resistant pancreatic cancer cell associates with alteration of memory CD4+ T cells.

Authors:  Jianyou Gu; Junfeng Zhang; Wenjie Huang; Tian Tao; Yaohuan Huang; Ludi Yang; Jiali Yang; Yingfang Fan; Huaizhi Wang
Journal:  Ann Transl Med       Date:  2020-03
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