Literature DB >> 29536449

Metabolomics: A High-Throughput Platform for Metabolite Profile Exploration.

Jing Cheng1, Wenxian Lan2, Guangyong Zheng3, Xianfu Gao4.   

Abstract

Metabolomics aims to quantitatively measure small-molecule metabolites in biological samples, such as bodily fluids (e.g., urine, blood, and saliva), tissues, and breathe exhalation, which reflects metabolic responses of a living system to pathophysiological stimuli or genetic modification. In the past decade, metabolomics has made notable progresses in providing useful systematic insights into the underlying mechanisms and offering potential biomarkers of many diseases. Metabolomics is a complementary manner of genomics and transcriptomics, and bridges the gap between genotype and phenotype, which reflects the functional output of a biological system interplaying with environmental factors. Recently, the technology of metabolomics study has been developed quickly. This review will discuss the whole pipeline of metabolomics study, including experimental design, sample collection and preparation, sample detection and data analysis, as well as mechanism interpretation, which can help understand metabolic effects and metabolite function for living organism in system level.

Keywords:  Biomarker; Metabolic response; Metabolite profile; Metabolomics; Underlying mechanism

Mesh:

Substances:

Year:  2018        PMID: 29536449     DOI: 10.1007/978-1-4939-7717-8_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  8 in total

1.  Metabolomics identifies serum and exosomes metabolite markers of pancreatic cancer.

Authors:  Lianyuan Tao; Juntuo Zhou; Chunhui Yuan; Lingfu Zhang; Deyu Li; Dandan Si; Dianrong Xiu; Lijun Zhong
Journal:  Metabolomics       Date:  2019-05-30       Impact factor: 4.290

2.  Pseudouridine and N-formylmethionine associate with left ventricular mass index: Metabolome-wide association analysis of cardiac remodeling.

Authors:  Alexander C Razavi; Lydia A Bazzano; Jiang He; Shengxu Li; Camilo Fernandez; Seamus P Whelton; Marie Krousel-Wood; Jovia L Nierenberg; Mengyao Shi; Changwei Li; Xuenan Mi; Jason Kinchen; Tanika N Kelly
Journal:  J Mol Cell Cardiol       Date:  2020-02-11       Impact factor: 5.000

3.  Fecal Metabolomics Reveals Distinct Profiles of Kidney Transplant Recipients and Healthy Controls.

Authors:  Soumaya Kouidhi; Oumaima Zidi; Muhanad Alhujaily; Nessrine Souai; Amor Mosbah; Tareg M Belali; Kais Ghedira; Imene El Kossai; Jamelddine El Manaa; Wissem Mnif; Ameur Cherif
Journal:  Diagnostics (Basel)       Date:  2021-04-29

4.  Application of Plant Growth Regulators Modulates the Profile of Chlorogenic Acids in Cultured Bidens pilosa Cells.

Authors:  Anza-Tshilidzi Ramabulana; Paul A Steenkamp; Ntakadzeni E Madala; Ian A Dubery
Journal:  Plants (Basel)       Date:  2021-02-25

5.  Finding Correspondence between Metabolomic Features in Untargeted Liquid Chromatography-Mass Spectrometry Metabolomics Datasets.

Authors:  Rui Climaco Pinto; Ibrahim Karaman; Matthew R Lewis; Jenny Hällqvist; Manuja Kaluarachchi; Gonçalo Graça; Elena Chekmeneva; Brenan Durainayagam; Mohsen Ghanbari; M Arfan Ikram; Henrik Zetterberg; Julian Griffin; Paul Elliott; Ioanna Tzoulaki; Abbas Dehghan; David Herrington; Timothy Ebbels
Journal:  Anal Chem       Date:  2022-03-31       Impact factor: 6.986

6.  Untargeted metabolomics using liquid chromatography coupled with mass spectrometry for rapid discovery of metabolite biomarkers to reveal therapeutic effects of Psoralea corylifolia seeds against osteoporosis.

Authors:  Fu-Jiang Zhao; Zhao-Bo Zhang; Ning Ma; Xiao Teng; Zhen-Cheng Cai; Ming-Xi Liu
Journal:  RSC Adv       Date:  2019-11-01       Impact factor: 4.036

7.  Application of metabolomics and network analysis to reveal the ameliorating effect of four typical "hot" property herbs on hypothyroidism rats.

Authors:  Yang-Yang Wang; Yan-Ping Sun; Bing-You Yang; Qiu-Hong Wang; Hai-Xue Kuang
Journal:  Front Pharmacol       Date:  2022-08-25       Impact factor: 5.988

8.  Integration of Gas Exchange With Metabolomics: High-Throughput Phenotyping Methods for Screening Biostimulant-Elicited Beneficial Responses to Short-Term Water Deficit.

Authors:  Giulia Antonucci; Michele Croci; Begoña Miras-Moreno; Alessandra Fracasso; Stefano Amaducci
Journal:  Front Plant Sci       Date:  2021-06-01       Impact factor: 5.753

  8 in total

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