Literature DB >> 29524510

WebPropagate: A Web Server for Network Propagation.

Hadas Biran1, Tovi Almozlino1, Martin Kupiec2, Roded Sharan3.   

Abstract

Network propagation is a powerful tool for genetic analysis which is widely used to identify genes and genetic modules that underlie a process of interest. Here we provide a graphical, web-based platform (http://anat.cs.tau.ac.il/WebPropagate/) in which researchers can easily apply variants of this method to data sets of interest using up-to-date networks of protein-protein interactions in several organisms.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Keywords:  gene prioritization; network diffusion; p-value computation; protein–protein interaction network; subnetwork inference

Mesh:

Substances:

Year:  2018        PMID: 29524510     DOI: 10.1016/j.jmb.2018.02.025

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  3 in total

1.  Comparative Analysis of Normalization Methods for Network Propagation.

Authors:  Hadas Biran; Martin Kupiec; Roded Sharan
Journal:  Front Genet       Date:  2019-01-22       Impact factor: 4.599

Review 2.  Angiogenesis goes computational - The future way forward to discover new angiogenic targets?

Authors:  Abhishek Subramanian; Pooya Zakeri; Mira Mousa; Halima Alnaqbi; Fatima Yousif Alshamsi; Leo Bettoni; Ernesto Damiani; Habiba Alsafar; Yvan Saeys; Peter Carmeliet
Journal:  Comput Struct Biotechnol J       Date:  2022-09-13       Impact factor: 6.155

3.  G2G: A web-server for the prediction of human synthetic lethal interactions.

Authors:  Yom Tov Almozlino; Iftah Peretz; Martin Kupiec; Roded Sharan
Journal:  Comput Struct Biotechnol J       Date:  2020-04-27       Impact factor: 7.271

  3 in total

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