| Literature DB >> 29523176 |
Angela M Cadavid Restrepo1, Yu Rong Yang2,3, Donald P McManus3, Darren J Gray4,3, Tamsin S Barnes5,6, Gail M Williams7, Ricardo J Soares Magalhães5,8, Archie C A Clements4.
Abstract
BACKGROUND: Human echinococcoses are parasitic helminth infections that constitute a serious public health concern in several regions across the world. Cystic (CE) and alveolar echinococcosis (AE) in China represent a high proportion of the total global burden of these infections. This study was conducted to predict the spatial distribution of human seropositivity for Echinococcus species in Xiji County, Ningxia Hui Autonomous Region (NHAR), with the aim of identifying communities where targeted prevention and control efforts are required.Entities:
Keywords: Echinococcus granulosus; Echinococcus multilocularis; Environment; Geographical information systems; Human echinococcoses; Ningxia Hui Autonomous Region; Remote sensing; Xiji County
Mesh:
Substances:
Year: 2018 PMID: 29523176 PMCID: PMC5845300 DOI: 10.1186/s13071-018-2764-1
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Fig. 1Map and elevation of Xiji County and its location within NHAR, and the location of the Autonomous Region within China
Fig. 2Distribution of school surveys and observed seropositivity for Echinococcus granulosus and E. multilocularis in 2002–2003 (a, d), 2006–2007 (b, e) and 2012–2013 (c, f) in Xiji County, NHAR, China. A surface of the different land cover types in 2000, 2005 and 2010, respectively, is also presented
Land cover classification scheme and definitions
| Land cover type | Description | Content |
|---|---|---|
| Water bodies | All areas of water | Streams and canals, lakes, reservoirs, bays and estuaries |
| Artificial surfaces | Land modified by human activities | Residential areas, industrial and commercial complexes, transport infrastructure, communications and utilities, mixed urban or built-up land and other built-up land |
| Bare or sparsely vegetated areas | Areas with little or no “green” vegetation present | Dry salt flats, sandy areas, bared exposed rock and mixed barren land |
| Herbaceous vegetation | Areas characterized by natural or semi-natural vegetation | Grasses and forbs |
| Cultivated land | Areas where the natural vegetation has been removed/modified and replaced by other types of vegetative cover that have been planted for specific purposes such as food, feed and gardening | Cropland and pasture, orchards, groves, vineyards, nurseries and ornamental horticultural, other cultivated land |
| Shrubland | Natural or semi-natural woody vegetation with aerial stems less than 6 m tall | Evergreen and deciduous species of true shrubs and trees or shrubs that are small or stunted |
| Forest | Areas characterized by tree cover or semi-natural woody vegetation greater than 6 m tall | Deciduous forest, evergreen forest and mixed forest |
Description of the landscape fragmentation metrics that were included in the analyses of human seropositivity for E. granulosus and E. multilocularis in Xiji County
| Metric | Description | Units |
|---|---|---|
| Composition | ||
| Number of patches (NumP) | Total number of patches within a buffer | – |
| Patch density (PD) | Total number of patches per buffer area | /km2 |
| Mean patch size (MPS) | Average patch size within a buffer | km |
| Shape | ||
| Mean shape index (MSI) | Ratio of perimeter to area adjusted by a constant to account for a particular patch shape | – |
| Configuration | ||
| Edge density (ED) | Amount of edge relative to the buffer area | km/km2 (perimeter/area ratio) |
Human seroprevalence of Echinococcus granulosus and E. multilocularis infection stratified by gender from three school-based surveys conducted in Xiji County in 2002–2003 (survey 1), 2006–2007 (survey 2) and 2012–2013 (survey 3)
|
|
| Total | |||
|---|---|---|---|---|---|
| Positive | Negative | Positive | Negative | ||
| Survey 1 | 142 (16.8) | 703 (83.2) | 153 (18.1) | 692 (81.9) | 845 (100) |
| Survey 2 | 799 (30.9) | 1789 (69.1) | 331 (12.8) | 2257 (87.2) | 2588 (100) |
| Survey 3 | 765 (45.6) | 912 (54.4) | 141 (8.4) | 1536 (91.5) | 1677 (100) |
| Total | 1706 (33.4) | 3404 (66.6) | 625 (12.2) | 4485 (87.8) | 5110 (100) |
Regression coefficients, ORs and 95% CrI from the Bayesian spatial model (Model II) for human seropositivity for Echinococcus granulosus in three school-based surveys conducted in Xiji County in 2002–2003, 2006–2007 and 2012–2013
| Model | Coefficient, posterior mean (95% CrI) | OR, posterior mean (95% CrI) |
|---|---|---|
| α1 (Intercept study 1) | -0.23 (-1.79–1.27) | – |
| α2 (Intercept study2) | 0.94 (-0.74–2.56) | – |
| α3 (Intercept study 3) | 0.38 (-1.10–1.76) | – |
| Femalea | 0.14 (0.02–0.26) | 1.15 (1.01–1.29) |
| Age | -0.03 (-0.05– -0.01) | 0.97 (0.95–0.99) |
| Summer precipitation same year (1 km) | 0.01 (0.00–0.01) | 1.01 (1.01–1.02) |
| EVI same year (1 km) | -5.12 × 104 (-5.10 × 104–4.91 × 104) | 0.99 (0.99–1.00) |
| Cultivated land same year (1 km) | 3.24 × 103 (-3.22 × 103–9.94 × 103) | 1.00 (0.99–1.01) |
| Water bodies 5 years prior (1 km) | 0.06 (0.02–0.10) | 1.06 (1.02–1.10) |
| Forest same year (1 km) | 0.01 (-6.95 × 104–0.02) | 1.00 (0.99–1.01) |
| NumP 5-year average (1 km) | -0.01 (-0.02– -0.01) | 0.98 (0.97–0.99) |
| PD 5-year average (1 km) | 1.08 (-0.23–2.83) | 2.95 (0.79–16.89) |
| MPS 5-year average (1 km) | -1.04 (-1.76– -0.30) | 0.35 (0.17–0.73) |
| Winter precipitation same year (5 km) | -0.07 (-0.09– -0.04) | 0.93 (0.91–0.95) |
| Bareland/art surfaces same year (5 km) | -0.02 (-0.03– -0.01) | 0.98 (0.96–0.99) |
| Forest same year (5 km) | 0.02 (0.01–0.03) | 1.02 (1.01–1.03) |
| Water bodies 5 years prior (5 km) | 0.17 (0.01–0.32) | 1.18 (1.01–1.38) |
| Herbaceous vegetation 5 years prior (1 km) | 0.01 (-0.01–0.02) | 1.01 (0.99–1.02) |
| Shrubland 5 years prior (5 km) | 1.08 (0.36–1.82) | 2.94 (1.44–6.23) |
| Cultivated land 5 years prior (5 km) | -0.01 (-0.02–0.01) | 0.98 (0.97–1.10) |
| MPS 5 years prior (5 km) | -0.14 (-0.54–0.17) | 0.86 (0.58–1.19) |
| Heterogeneity structured (survey 1) | 8.40 × 104 (1.63 × 104–4.12 × 103) | – |
| Heterogeneity structured (survey 2) | 1.18 × 103 (2.42 × 104–4.42 × 103) | – |
| Heterogeneity structured (survey 3) | 7.18 × 104 (1.75 × 104 –2.79 × 103) | – |
| 0.61 (0.04–1.31) | – | |
| 0.19 (0.03–0.56) | – | |
| 0.17 (0.02–0.50) | – | |
| DIC | 6197 | – |
Abbreviations: OR odds ratio, 95% CrI 95% credible interval, DIC deviance information criterion
aReference category: gender (male)
Regression coefficients, ORs and 95% CrI from Bayesian spatial model (Model II) for human seropositivity for Echinococcus multilocularis in three school-based surveys conducted in Xiji County in 2002–2003, 2006–2007 and 2012–2013
| Model/Variable | Coefficient, posterior mean (95% CrI) | OR, posterior mean (95% CrI) |
|---|---|---|
| α1 (Intercept study 1) | -2.25 (-3.38– -1.39) | – |
| α2 (Intercept study2) | -1.75 (-2.47– -0.94) | – |
| α3 (Intercept study 3) | -2.88 (-3.90– -2.13) | – |
| Femalea | 0.09 (-0.11–0.24) | 1.09 (0.89–1.28) |
| Age | -0.01 (-0.03–0.02) | 0.99 (0.96–1.02) |
| Summer precipitation same year (1 km) | 6.53 × 103 (3.40 × 103–9.31 × 103) | 1.01 (1.01–1.02) |
| EVI same year (1 km) | 4.97 × 106 (7.10 × 104–6.21 × 104) | 1.00 (0.99–1.00) |
| Bareland/Art surfaces same year (1 km) | -0.02 (-0.05–0.01) | 0.99 (0.99–1.00) |
| Cultivated land 5 years prior (1 km) | 0.01 (-0.01–0.02) | 1.01 (0.99–1.02) |
| Cultivated land same year (1 km) | -0.01 (-0.01–0.01) | 0.99 (0.98–1.01) |
| Herbaceous vegetation 5-year average (1 km) | -0.01 (-0.01–0.01) | 0.99 (0.98–1.00) |
| Water bodies average (1 km) | 0.60 (0.24–0.91) | 1.82 (1.27–2.50) |
| Forest same year (1 km) | -0.01 (-0.01–0.01) | 1.00 (0.99–1.01) |
| NumP 5-year average (1 km) | -0.01 (-0.02– -0.01) | 0.98 (0.97–0.99) |
| MPS 5-year average (1 km) | -0.19 (-0.68–0.13) | 0.82 (0.50–1.14) |
| ED 5-year average (1 km) | 5.11 × 103 (2.10 × 104–9.97 × 103) | 1.01 (1.01–1.02) |
| Elevation (5 km) | 3.99 × 104 (1.64 × 103–1.00 × 103) | 0.99 (0.99–1.01) |
| Winter precipitation 5-year average (5 km) | -0.11 (-0.17– -0.04) | 0.89 (0.83–0.95) |
| Summer temperature 5 years prior (5 km) | -0.01 (-0.38–0.35) | 0.99 (0.67–1.42) |
| Forest 5-year average (5 km) | 0.01 (-0.01–0.01) | 1.00 (0.99–1.01) |
| Water bodies 5 years prior (5 km) | 0.02 (-0.16–0.20) | 1.02 (0.84–1.23) |
| Water bodies 5-year average (5 km) | -0.02 (-0.07–0.01) | 0.97 (0.92–1.01) |
| Shrubland 5 years prior (5 km) | -1.58 (-2.95– -0.29) | 0.20 (0.05–0.74) |
| Shrubland same year (5 km) | 0.95 (-0.45–2.10) | 2.59 (0.63–8.23) |
| Cultivated land same year (5 km) | -0.01 (-0.02–0.01) | 0.99 (0.97–1.01) |
| NumP same year (5 km) | 1.66 × 104 (1.25 × 104–4.71 × 104) | 1.01 (0.99–1.01) |
| Heterogeneity structured (survey 1) | 3.09 × 103 (5.33 × 104–9.19 × 103) | – |
| Heterogeneity structured (survey 2) | 2.29 × 103 (3.11 × 104–5.28 × 103) | – |
| Heterogeneity structured (survey 3) | 2.29 × 103 (3.11 × 104–5.28 × 103) | – |
| 0.07 (0.01–0.23) | – | |
| 0.10 (0.02–0.40) | – | |
| 0.26 (0.09–0.52) | – | |
| DIC | 3697 | – |
Abbreviations: OR odds ratio, 95% CrI 95% credible interval, DIC deviance information criterion
aReference category: gender (male)
Fig. 3Spatial distribution of predicted seropositivity for Echinococcus granulosus in schoolchildren aged 6–18 years and standard deviations in 2002–2003 (a, d), 2006–2007 (b, e) and 2012–2013 (c, f) in Xiji County, NHAR, China
Fig. 4Spatial distribution of predicted seropositivity for Echinococcus multilocularis in schoolchildren aged 6–18 years and standard deviations in 2002–2003 (a, d), 2006–2007 (b, e) and 2012–2013 (c, f) in Xiji County, NHAR, China