Literature DB >> 29522738

Using Metagenomics to Characterize an Expanding Virosphere.

Yong-Zhen Zhang1, Mang Shi2, Edward C Holmes2.   

Abstract

We know less about viruses than any other lifeform. Fortunately, metagenomics has led to a massive expansion in the known diversity of the virosphere. Here, we discuss how metagenomics has changed our understanding of RNA viruses and present some of the remaining challenges, including characterization of the "dark matter" of divergent viral genomes.
Copyright © 2018 Elsevier Inc. All rights reserved.

Mesh:

Year:  2018        PMID: 29522738     DOI: 10.1016/j.cell.2018.02.043

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  69 in total

Review 1.  Evolutionary Virology at 40.

Authors:  Jemma L Geoghegan; Edward C Holmes
Journal:  Genetics       Date:  2018-12       Impact factor: 4.562

2.  Homologous recombination is an intrinsic defense against antiviral RNA interference.

Authors:  Lauren C Aguado; Tristan X Jordan; Emily Hsieh; Daniel Blanco-Melo; John Heard; Maryline Panis; Marco Vignuzzi; Benjamin R tenOever
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-12       Impact factor: 11.205

3.  Comparison of Viromes in Ticks from Different Domestic Animals in China.

Authors:  Tingting Zhao; Haiyan Gong; Xiaojuan Shen; Wen Zhang; Tongling Shan; Xiangqian Yu; Seong Jin Wang; Li Cui
Journal:  Virol Sin       Date:  2020-03-10       Impact factor: 4.327

4.  A Needle in A Haystack: Tracing Bivalve-Associated Viruses in High-Throughput Transcriptomic Data.

Authors:  Umberto Rosani; Maxwell Shapiro; Paola Venier; Bassem Allam
Journal:  Viruses       Date:  2019-03-01       Impact factor: 5.048

5.  Viral Discovery in the Invasive Australian Cane Toad (Rhinella marina) Using Metatranscriptomic and Genomic Approaches.

Authors:  Alice G Russo; John-Sebastian Eden; Daniel Enosi Tuipulotu; Mang Shi; Daniel Selechnik; Richard Shine; Lee Ann Rollins; Edward C Holmes; Peter A White
Journal:  J Virol       Date:  2018-08-16       Impact factor: 5.103

Review 6.  The Intestinal Virome and Immunity.

Authors:  Jessica A Neil; Ken Cadwell
Journal:  J Immunol       Date:  2018-09-15       Impact factor: 5.422

Review 7.  Evolution and ecology of plant viruses.

Authors:  Pierre Lefeuvre; Darren P Martin; Santiago F Elena; Dionne N Shepherd; Philippe Roumagnac; Arvind Varsani
Journal:  Nat Rev Microbiol       Date:  2019-07-16       Impact factor: 60.633

8.  Viromes in marine ecosystems reveal remarkable invertebrate RNA virus diversity.

Authors:  Yu-Yi Zhang; Yicong Chen; Xiaoman Wei; Jie Cui
Journal:  Sci China Life Sci       Date:  2021-06-17       Impact factor: 6.038

9.  Multiple Infiltration and Cross-Species Transmission of Foamy Viruses across the Paleozoic to the Cenozoic Era.

Authors:  Yicong Chen; Yu-Yi Zhang; Xiaoman Wei; Jie Cui
Journal:  J Virol       Date:  2021-06-24       Impact factor: 5.103

10.  The Diversity of Viral Community in Invasive Fruit Flies (Bactrocera and Zeugodacus) Revealed by Meta-transcriptomics.

Authors:  Wei Zhang; Yan-Chun Zhang; Zi-Guo Wang; Qiao-Ying Gu; Jin-Zhi Niu; Jin-Jun Wang
Journal:  Microb Ecol       Date:  2021-06-25       Impact factor: 4.552

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