| Literature DB >> 29518100 |
Visalini Nair-Shalliker1,2,3, Sam Egger1, Agata Chrzanowska2, Rebecca Mason4, Louise Waite5, David Le Couteur5, Markus J Seibel5, David J Handelsman5, Robert Cumming2,5,6, David P Smith1,2,7, Bruce K Armstrong2,8.
Abstract
BACKGROUND: Melanoma and prostate cancer may share risk factors. This study examined the association between serum PSA levels, which is a risk factor for prostate cancer, and variants in some melanoma-associated pigmentary genes.Entities:
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Year: 2018 PMID: 29518100 PMCID: PMC5843239 DOI: 10.1371/journal.pone.0193893
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Cross-sectional analysis of the % differences in mean serum PSA level according participant characteristics.
| Characteristic | N (%) | Mean PSA (ng/mL) | Adjusted % difference in mean PSA | p-value |
|---|---|---|---|---|
| All participants | 1033 (100%) | 3.2 | ||
| Median (range) | 76 (70 to 96) | +2.7 (1.2, +4.2) | <0.001 | |
| ANZ | 512 (50%) | 3.7 | ref. | <0.001 |
| Europe | 415 (40%) | 2.5 | -29.7 (-40.8, -16.4) | |
| Elsewhere | 106 (10%) | 3.2 | -11.7 (-36.2, +22.1) | |
| Median (range) | 54 (3 to 219) | +0.3 (-0.2, 0.8) | 0.199 | |
| <50 | 431 (42%) | 2.9 | ref. | 0.190 |
| ≥50 | 602 (58%) | 3.3 | +11.9 (-5.4, 32.2) | |
| | ||||
| | 178 (17%) | 3.5 | ref. | 0.385 |
| | 334 (32%) | 3.8 | +11.7 (-12.9, +43.2) | |
| | ||||
| | 198 (19%) | 2.5 | ref. | 0.956 |
| | 217 (21%) | 2.5 | -0.6 (-20.0, +23.4) | |
| | ||||
| | 55 (5%) | 2.4 | ref. | 0.101 |
| | 51 (8%) | 3.9 | +49.1 (-7.5, +140.3) | |
| Median (range) | 28 (17 to 60) | +0.4 (-1.5, +2.4) | 0.662 | |
| <25 | 207 (20%) | 3.3 | ref. | 0.763 |
| ≥25 | 826 (80%) | 3.1 | +2.9 (-14.5, +23.9) | |
| | ||||
| | 117 (11%) | 3.7 | ref. | 0.861 |
| | 395 (38%) | 3.7 | +2.1 (-18.9, +28.5) | |
| | ||||
| | 48 (5%) | 2.1 | ref. | 0.107 |
| | 367 (36%) | 2.5 | +23.4 (-4.4, +59.2) | |
| | ||||
| | 42 (4%) | 3.7 | ref. | 0.893 |
| | 64 (6%) | 2.8 | -3.8 (-45.7, +70.2) |
1 Adjusted for age, plasma 25OHD level, BMI and region of birth.
2% difference per unit increase characteristic, where an increase in PSA levels was denoted by a plus (+) sign and a decrease by a minus (-) sign.
3 Men not born in Australia, New Zealand or Europe.
Odds ratios (OR) and 95% confidence intervals (95%CI) for single nucleotide polymorphism in the pigmentary gene by region of birth.
| Function | SNP | Australia | Europe | Elsewhere | p-value | |||
|---|---|---|---|---|---|---|---|---|
| % WM, MM | OR (ref) | % WM, MM | OR (95%CI) | % WM, MM | OR (95%CI) | |||
| SLC45A2 | rs28777 | 6.1 | 19.4 | 3.67 (2.37, 5.69) | 69.5 | 34.88 (20.08, 60.58) | <0.001 | |
| SLC45A2 | rs16891982 | 7.5 | 22.3 | 3.56 (2.38, 5.34) | 74.3 | 35.81 (20.69, 61.97) | <0.001 | |
| MC1R | rs1805007 | 14.7 | 9.1 | 0.58 (0.38, 0.88) | 2.8 | 0.17 (0.05, 0.55) | 0.001 | |
| ASIP | rs4911414 | 56.8 | 49.3 | 0.74 (0.57, 0.96) | 30.2 | 0.33 (0.21, 0.52) | <0.001 | |
| ASIP | rs1015362 | 42.4 | 48.8 | 1.29 (1.00, 1.68) | 34.9 | 0.73 (0.47, 1.13) | 0.020 | |
| IRF4 | rs12203592 | 39.5 | 20.6 | 0.40 (0.30, 0.54) | 8.6 | 0.14 (0.07, 0.29) | <0.001 | |
| SLC24A4 | rs12896399 | 70.9 | 61.8 | 0.67 (0.50, 0.88) | 62.3 | 0.68 (0.44, 1.05) | 0.010 | |
| TYR | rs1042602 | 57.8 | 68.8 | 1.61 (1.22, 2.11) | 26.4 | 0.26 (0.16, 0.42) | <0.001 | |
| TYR | rs1126809 | 54.1 | 42.7 | 0.63 (0.49, 0.82) | 14.3 | 0.14 (0.08, 0.25) | <0.001 | |
| TYRP1 | rs1408799 | 54.2 | 55.0 | 1.03 (0.79, 1.34) | 83.0 | 4.13 (2.41, 7.06) | <0.001 | |
| OCA2 | rs7495174 | 12.5 | 30.5 | 3.06 (2.18, 4.28) | 53.8 | 8.11 (5.10, 12.88) | <0.001 | |
1 For men not born in Australia, New Zealand or Europe.
2 MM = two copies of the variant and WM = one copy of the variant
3p-value for test of equal ORs across regions of birth
Adjusted percent difference in mean serum prostate specific antigen level in men with one or two variant pigmentary gene alleles compared to men with no variant alleles in the three birth regions.
| Gene | SNP | Alleles (variant vs. ref) | % difference in mean PSA (95% CI) | ||||
|---|---|---|---|---|---|---|---|
| All birth regions | ANZ | Europe | Elsewhere | ||||
| SLC45A2 | rs28777 | CA-CC vs. AA | -23.8 (-40.2, -2.9) | -7.6 (-47.1, +61.4) | 0.808 | ||
| SLC45A2 | rs16891982 | GC-CC vs. GG | -18.8 (-35.7, +2.5) | +3.7 (-42.3, +86.4) | 0.738 | ||
| MCIR | rs1805007 | CT-TT vs. CC | +3.4 (-17.9, +30.2) | +23.7 (-6.2, +63.1) | -45.6 (-59.8, -26.3) | -21.4 (-59.0, +50.4) | |
| ASIP | rs4911414 | GT-TT vs. GG | +9.7 (-5.3, +27.2) | +33.7 (9.8, +62.9) | -9.7 (-27.2, +12.0) | -40.4 (-66.4, +5.8) | |
| ASIP | rs1015362 | GA-AA vs. GG | +6.7 (-9.3, +25.6) | +19.3 (-4.3, +48.7) | -6.3 (-24.4, +16.2) | -20.7 (-56.4, +44.1) | 0.23 |
| IRF4 | rs12203592 | CT-TT vs. CC | +11.8 (-6.2, +33.2) | +12.7 (-10.2, +41.6) | -2.3 (-24.4, +26.1) | +91.6 (0.3, +265.9) | 0.182 |
| OCA2 | rs7495174 | AG-GG vs. AA | +0.3 (-15.5, +19.0) | -17.0 (-36.7, +9.0) | +14.0 (-10.0, +44.4) | +12.9 (-34.3, +93.8) | 0.225 |
| TYR | rs1042602 | CA-AA vs. CC | +7.8 (-7.6, +25.8) | +11.0 (-11.3, +38.9) | +13.3 (-8.6, +40.4) | -25.7 (-55.5, +24.0) | 0.382 |
| TYR | rs1126809 | GA-AA vs. GG | -3.5 (-18.4, +14.2) | +1.7 (-19.9, + 29.2) | -15.2 (-31.2, +4.5) | -3.2 (-51.7, +94.0) | 0.446 |
| SLC24A4 | rs12896399 | GT-TT vs. GG | +5.9 (-9.8, +24.2) | +12.7 (-10.6, +42.2) | +0.7 (-20.8, +28.0) | -12.1 (-48.9, +51.0) | 0.771 |
| TYRP1 | rs1408799 | TC-TT vs. CC | -8.0 (-21.5, +8.0) | -2.4 (-22.2, +22.5) | -13.6 (-30.1, +6.9) | -26.2 (-58.9, +32.7) | 0.61 |
1 Adjusted for age, serum 25OHD level, BMI and region of birth
2 Adjusted for age, serum 25OHD level and BMI
3p-interaction is p-value for the interaction test of whether adjusted % difference in mean PSA differs according to region of birth.
Adjusted percent difference in mean testosterone and dihydrotestosterone levels in men with one or two variant pigmentary gene alleles compared to men with no variant alleles.
| Gene | SNP | Alleles (variant vs. ref.) | % difference in mean testosterone (95% CI) | ||||
|---|---|---|---|---|---|---|---|
| All regions | ANZ | Europe | Elsewhere | ||||
| MCIR | rs1805007 | CT-TT vs. CC | 6.9 (-2.6, 17.3) | -21.1 (-43.0, 9.2) | |||
| ASIP | rs4911414 | GT-TT vs. GG | 0.7 (-4.1, 5.7) | 0.6 (-6.3, 8.1) | 2.4 (-4.7, 10.1) | -6.5 (-20.2, 9.5) | 0.577 |
| ASIP | rs1015362 | GA-AA vs. GG | 3.4 (-1.5, 8.5) | 3.7 (-3.4, 11.4) | 4.2 (-3.2, 12.1) | -4.6 (-17.6, 10.5) | 0.788 |
| SLC45A2 | rs28777 | CA-CC vs. AA | 1.5 (-4.9, 8.3) | 8.9 (-2.4, 21.4) | -0.6 (-9.1, 8.6) | 7.6 (-8.9, 27.2) | 0.361 |
| SLC45A2 | rs16891982 | GC-CC vs. GG | 0.8 (-5.4, 7.4) | 4.6 (-5.8, 16.0) | 0.2 (-8.3, 9.4) | 9.4 (-9.3, 32.0) | 0.705 |
| MCIR | rs1805007 | CT-TT vs. CC | 9.8 (-2.3, 23.5) | 9.0 (-7.2, 27.9) | 14.7 (-3.1, 35.8) | -23.1 (-55.0, 31.3) | 0.243 |
| ASIP | rs4911414 | GT-TT vs. GG | 3.2 (-4.7, 11.6) | 10.3 (-2.9, 25.3) | -3.0 (-12.6, 7.6) | -6.1 (-22.0, 13.1) | 0.235 |
| ASIP | rs1015362 | GA-AA vs. GG | 2.8 (-7.5, 14.2) | 6.5 (-10.9, 27.2) | 0.442 | ||
| SLC45A2 | rs28777 | CA-CC vs. AA | -0.3 (-9.0, 9.2) | 8.8 (-7.4, 27.9) | -3.2 (-14.9, 10.2) | 4.6 (-15.9, 30.1) | 0.474 |
| SLC45A2 | rs16891982 | GC-CC vs. GG | -0.8 (-9.3, 8.4) | 1.8 (-12.7, 18.7) | -0.4 (-12.3, 13.1) | 5.1 (-16.8, 32.8) | 0.845 |
1Adjusted for age, serum 25OHD level, and BMI region of birth
2Adjusted for age, serum 25OHD level, and BMI
3p-interaction is p-value for the interaction test of whether adjusted % difference in mean testosterone differs according to region of birth.
4p-interaction is p-value for the interaction test of whether adjusted % difference in mean dihydrotestosterone differs according to region of birth.