Literature DB >> 29514942

RecQ Helicases Function in Development, DNA Repair, and Gene Targeting in Physcomitrella patens.

Gertrud Wiedemann1, Nico van Gessel1, Fabian Köchl1, Lisa Hunn1, Katrin Schulze2, Lina Maloukh3, Fabien Nogué3, Eva L Decker1, Frank Hartung4, Ralf Reski5,6.   

Abstract

RecQ DNA helicases are genome surveillance proteins found in all kingdoms of life. They are characterized best in humans, as mutations in RecQ genes lead to developmental abnormalities and diseases. To better understand RecQ functions in plants we concentrated on Arabidopsis thaliana and Physcomitrella patens, the model species predominantly used for studies on DNA repair and gene targeting. Phylogenetic analysis of the six P. patens RecQ genes revealed their orthologs in humans and plants. Because Arabidopsis and P. patens differ in their RecQ4 and RecQ6 genes, reporter and deletion moss mutants were generated and gene functions studied in reciprocal cross-species and cross-kingdom approaches. Both proteins can be found in meristematic moss tissues, although at low levels and with distinct expression patterns. PpRecQ4 is involved in embryogenesis and in subsequent development as demonstrated by sterility of ΔPpRecQ4 mutants and by morphological aberrations. Additionally, ΔPpRecQ4 displays an increased sensitivity to DNA damages and an increased rate of gene targeting. Therefore, we conclude that PpRecQ4 acts as a repressor of recombination. In contrast, PpRecQ6 is not obviously important for moss development or DNA repair but does function as a potent enhancer of gene targeting.
© 2018 American Society of Plant Biologists. All rights reserved.

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Year:  2018        PMID: 29514942      PMCID: PMC5894843          DOI: 10.1105/tpc.17.00632

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  87 in total

1.  Effects of nutrients, cell density and culture techniques on protoplast regeneration and early protonema development in a moss, Physcomitrella patens.

Authors:  Gabriele Schween; Annette Hohe; Anna Koprivova; Ralf Reski
Journal:  J Plant Physiol       Date:  2003-02       Impact factor: 3.549

2.  Sgs1: a eukaryotic homolog of E. coli RecQ that interacts with topoisomerase II in vivo and is required for faithful chromosome segregation.

Authors:  P M Watt; E J Louis; R H Borts; I D Hickson
Journal:  Cell       Date:  1995-04-21       Impact factor: 41.582

3.  Gene Targeting for Precision Glyco-Engineering: Production of Biopharmaceuticals Devoid of Plant-Typical Glycosylation in Moss Bioreactors.

Authors:  Eva L Decker; Gertrud Wiedemann; Ralf Reski
Journal:  Methods Mol Biol       Date:  2015

4.  Differential requirements for RAD51 in Physcomitrella patens and Arabidopsis thaliana development and DNA damage repair.

Authors:  Ulrich Markmann-Mulisch; Edelgard Wendeler; Oliver Zobell; Gabriele Schween; Hans-Henning Steinbiss; Bernd Reiss
Journal:  Plant Cell       Date:  2007-10-05       Impact factor: 11.277

5.  Large-scale gene expression profiling data for the model moss Physcomitrella patens aid understanding of developmental progression, culture and stress conditions.

Authors:  Manuel Hiss; Oliver Laule; Rasa M Meskauskiene; Muhammad A Arif; Eva L Decker; Anika Erxleben; Wolfgang Frank; Sebastian T Hanke; Daniel Lang; Anja Martin; Christina Neu; Ralf Reski; Sandra Richardt; Mareike Schallenberg-Rüdinger; Peter Szövényi; Theodhor Tiko; Gertrud Wiedemann; Luise Wolf; Philip Zimmermann; Stefan A Rensing
Journal:  Plant J       Date:  2014-07-09       Impact factor: 6.417

6.  An improved and highly standardised transformation procedure allows efficient production of single and multiple targeted gene-knockouts in a moss, Physcomitrella patens.

Authors:  Annette Hohe; Tanja Egener; Jan M Lucht; Hauke Holtorf; Christina Reinhard; Gabriele Schween; Ralf Reski
Journal:  Curr Genet       Date:  2003-10-29       Impact factor: 3.886

7.  RAD51B plays an essential role during somatic and meiotic recombination in Physcomitrella.

Authors:  Florence Charlot; Liudmila Chelysheva; Yasuko Kamisugi; Nathalie Vrielynck; Anouchka Guyon; Aline Epert; Sylvia Le Guin; Didier G Schaefer; Andrew C Cuming; Mathilde Grelon; Fabien Nogué
Journal:  Nucleic Acids Res       Date:  2014-09-26       Impact factor: 16.971

Review 8.  Moss-made pharmaceuticals: from bench to bedside.

Authors:  Ralf Reski; Juliana Parsons; Eva L Decker
Journal:  Plant Biotechnol J       Date:  2015-05-25       Impact factor: 9.803

9.  trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses.

Authors:  Salvador Capella-Gutiérrez; José M Silla-Martínez; Toni Gabaldón
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

10.  Topoisomerase 3alpha and RMI1 suppress somatic crossovers and are essential for resolution of meiotic recombination intermediates in Arabidopsis thaliana.

Authors:  Frank Hartung; Stefanie Suer; Alexander Knoll; Rebecca Wurz-Wildersinn; Holger Puchta
Journal:  PLoS Genet       Date:  2008-12-19       Impact factor: 5.917

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  13 in total

Review 1.  Charting the genomic landscape of seed-free plants.

Authors:  Péter Szövényi; Andika Gunadi; Fay-Wei Li
Journal:  Nat Plants       Date:  2021-04-05       Impact factor: 15.793

Review 2.  Physcomitrella patens, a versatile synthetic biology chassis.

Authors:  Ralf Reski; Hansol Bae; Henrik Toft Simonsen
Journal:  Plant Cell Rep       Date:  2018-05-24       Impact factor: 4.570

3.  The Importance of ATM and ATR in Physcomitrella patens DNA Damage Repair, Development, and Gene Targeting.

Authors:  Martin Martens; Ralf Horres; Edelgard Wendeler; Bernd Reiss
Journal:  Genes (Basel)       Date:  2020-07-06       Impact factor: 4.096

4.  The loss of SMG1 causes defects in quality control pathways in Physcomitrella patens.

Authors:  James P B Lloyd; Daniel Lang; Andreas D Zimmer; Barry Causier; Ralf Reski; Brendan Davies
Journal:  Nucleic Acids Res       Date:  2018-06-20       Impact factor: 16.971

5.  Analysis of the recombination landscape of hexaploid bread wheat reveals genes controlling recombination and gene conversion frequency.

Authors:  Laura-Jayne Gardiner; Luzie U Wingen; Paul Bailey; Ryan Joynson; Thomas Brabbs; Jonathan Wright; James D Higgins; Neil Hall; Simon Griffiths; Bernardo J Clavijo; Anthony Hall
Journal:  Genome Biol       Date:  2019-04-15       Impact factor: 13.583

6.  CRISPR/Cas inactivation of RECQ4 increases homeologous crossovers in an interspecific tomato hybrid.

Authors:  Ruud A de Maagd; Annelies Loonen; Jihed Chouaref; Alexandre Pelé; Fien Meijer-Dekens; Paul Fransz; Yuling Bai
Journal:  Plant Biotechnol J       Date:  2019-09-30       Impact factor: 9.803

Review 7.  DNA- and DNA-Protein-Crosslink Repair in Plants.

Authors:  Janina Enderle; Annika Dorn; Holger Puchta
Journal:  Int J Mol Sci       Date:  2019-09-03       Impact factor: 5.923

Review 8.  Targeted Gene Knockouts by Protoplast Transformation in the Moss Physcomitrella patens.

Authors:  Lei Zhu
Journal:  Front Genome Ed       Date:  2021-12-17

9.  Maintaining Genome Integrity during Seed Development in Phaseolus vulgaris L.: Evidence from a Transcriptomic Profiling Study.

Authors:  José Ricardo Parreira; Alma Balestrazzi; Pedro Fevereiro; Susana de Sousa Araújo
Journal:  Genes (Basel)       Date:  2018-09-20       Impact factor: 4.096

Review 10.  DNA Helicases as Safekeepers of Genome Stability in Plants.

Authors:  Annika Dorn; Holger Puchta
Journal:  Genes (Basel)       Date:  2019-12-10       Impact factor: 4.096

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