Literature DB >> 29514063

The Mitochondrial Acylome Emerges: Proteomics, Regulation by Sirtuins, and Metabolic and Disease Implications.

Chris Carrico1, Jesse G Meyer2, Wenjuan He3, Brad W Gibson2, Eric Verdin4.   

Abstract

Post-translational modification of lysine residues via reversible acylation occurs on proteins from diverse pathways, functions, and organisms. While nuclear protein acylation reflects the competing activities of enzymatic acyltransferases and deacylases, mitochondrial acylation appears to be driven mostly via a non-enzymatic mechanism. Three protein deacylases, SIRT3, SIRT4, and SIRT5, reside in the mitochondria and remove these modifications from targeted proteins in an NAD+-dependent manner. Recent proteomic surveys of mitochondrial protein acylation have identified the sites of protein acetylation, succinylation, glutarylation, and malonylation and their regulation by SIRT3 and SIRT5. Here, we review recent advances in this rapidly moving field, their biological significance, and their implications for mitochondrial function, metabolic regulation, and disease pathogenesis.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  SIRT3; SIRT4; SIRT5; mitochondrial acylation; sirtuin biology

Mesh:

Substances:

Year:  2018        PMID: 29514063      PMCID: PMC5863732          DOI: 10.1016/j.cmet.2018.01.016

Source DB:  PubMed          Journal:  Cell Metab        ISSN: 1550-4131            Impact factor:   27.287


  100 in total

1.  Sirtuins deacetylate and activate mammalian acetyl-CoA synthetases.

Authors:  William C Hallows; Susan Lee; John M Denu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-21       Impact factor: 11.205

2.  Adenine nucleotide translocase is acetylated in vivo in human muscle: Modeling predicts a decreased ADP affinity and altered control of oxidative phosphorylation.

Authors:  Clinton Mielke; Natalie Lefort; Carrie G McLean; Jeanine M Cordova; Paul R Langlais; Andrew J Bordner; Jerez A Te; S Banu Ozkan; Wayne T Willis; Lawrence J Mandarino
Journal:  Biochemistry       Date:  2014-06-09       Impact factor: 3.162

3.  Identification of lysine succinylation as a new post-translational modification.

Authors:  Zhihong Zhang; Minjia Tan; Zhongyu Xie; Lunzhi Dai; Yue Chen; Yingming Zhao
Journal:  Nat Chem Biol       Date:  2010-12-12       Impact factor: 15.040

4.  SIRT3 deacetylates mitochondrial 3-hydroxy-3-methylglutaryl CoA synthase 2 and regulates ketone body production.

Authors:  Tadahiro Shimazu; Matthew D Hirschey; Lan Hua; Kristin E Dittenhafer-Reed; Bjoern Schwer; David B Lombard; Yu Li; Jakob Bunkenborg; Frederick W Alt; John M Denu; Matthew P Jacobson; Eric Verdin
Journal:  Cell Metab       Date:  2010-12-01       Impact factor: 27.287

5.  Activation of SIRT3 by the NAD⁺ precursor nicotinamide riboside protects from noise-induced hearing loss.

Authors:  Kevin D Brown; Sadia Maqsood; Jing-Yi Huang; Yong Pan; William Harkcom; Wei Li; Anthony Sauve; Eric Verdin; Samie R Jaffrey
Journal:  Cell Metab       Date:  2014-12-02       Impact factor: 27.287

6.  Suppression of oxidative stress by β-hydroxybutyrate, an endogenous histone deacetylase inhibitor.

Authors:  Tadahiro Shimazu; Matthew D Hirschey; John Newman; Wenjuan He; Kotaro Shirakawa; Natacha Le Moan; Carrie A Grueter; Hyungwook Lim; Laura R Saunders; Robert D Stevens; Christopher B Newgard; Robert V Farese; Rafael de Cabo; Scott Ulrich; Katerina Akassoglou; Eric Verdin
Journal:  Science       Date:  2012-12-06       Impact factor: 47.728

7.  SIRT3 is pro-apoptotic and participates in distinct basal apoptotic pathways.

Authors:  Simon J Allison; Jo Milner
Journal:  Cell Cycle       Date:  2007-08-10       Impact factor: 4.534

8.  Crystal structures of the mitochondrial deacylase Sirtuin 4 reveal isoform-specific acyl recognition and regulation features.

Authors:  Martin Pannek; Zeljko Simic; Matthew Fuszard; Marat Meleshin; Dante Rotili; Antonello Mai; Mike Schutkowski; Clemens Steegborn
Journal:  Nat Commun       Date:  2017-11-15       Impact factor: 14.919

9.  Proteomic and Biochemical Studies of Lysine Malonylation Suggest Its Malonic Aciduria-associated Regulatory Role in Mitochondrial Function and Fatty Acid Oxidation.

Authors:  Gozde Colak; Olga Pougovkina; Lunzhi Dai; Minjia Tan; Heleen Te Brinke; He Huang; Zhongyi Cheng; Jeongsoon Park; Xuelian Wan; Xiaojing Liu; Wyatt W Yue; Ronald J A Wanders; Jason W Locasale; David B Lombard; Vincent C J de Boer; Yingming Zhao
Journal:  Mol Cell Proteomics       Date:  2015-08-28       Impact factor: 5.911

10.  Interaction of Sirt3 with OGG1 contributes to repair of mitochondrial DNA and protects from apoptotic cell death under oxidative stress.

Authors:  Y Cheng; X Ren; A S P Gowda; Y Shan; L Zhang; Y-S Yuan; R Patel; H Wu; K Huber-Keener; J W Yang; D Liu; T E Spratt; J-M Yang
Journal:  Cell Death Dis       Date:  2013-07-18       Impact factor: 8.469

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  94 in total

1.  Epigenetic Regulation of Metabolism and Inflammation by Calorie Restriction.

Authors:  Diego Hernández-Saavedra; Laura Moody; Guanying Bianca Xu; Hong Chen; Yuan-Xiang Pan
Journal:  Adv Nutr       Date:  2019-05-01       Impact factor: 8.701

Review 2.  NAD+ metabolism and its roles in cellular processes during ageing.

Authors:  Anthony J Covarrubias; Rosalba Perrone; Alessia Grozio; Eric Verdin
Journal:  Nat Rev Mol Cell Biol       Date:  2020-12-22       Impact factor: 94.444

Review 3.  Decoding the rosetta stone of mitonuclear communication.

Authors:  Justin English; Jyung Mean Son; Maria Dafne Cardamone; Changhan Lee; Valentina Perissi
Journal:  Pharmacol Res       Date:  2020-08-23       Impact factor: 7.658

4.  Disruption of Acetyl-Lysine Turnover in Muscle Mitochondria Promotes Insulin Resistance and Redox Stress without Overt Respiratory Dysfunction.

Authors:  Ashley S Williams; Timothy R Koves; Michael T Davidson; Scott B Crown; Kelsey H Fisher-Wellman; Maria J Torres; James A Draper; Tara M Narowski; Dorothy H Slentz; Louise Lantier; David H Wasserman; Paul A Grimsrud; Deborah M Muoio
Journal:  Cell Metab       Date:  2019-12-05       Impact factor: 27.287

Review 5.  Matrix Redox Physiology Governs the Regulation of Plant Mitochondrial Metabolism through Posttranslational Protein Modifications.

Authors:  Ian Max Møller; Abir U Igamberdiev; Natalia V Bykova; Iris Finkemeier; Allan G Rasmusson; Markus Schwarzländer
Journal:  Plant Cell       Date:  2020-01-06       Impact factor: 11.277

6.  Crosstalk Between Mitochondrial Hyperacetylation and Oxidative Stress in Vascular Dysfunction and Hypertension.

Authors:  Sergey I Dikalov; Anna E Dikalova
Journal:  Antioxid Redox Signal       Date:  2019-02-28       Impact factor: 8.401

Review 7.  Mitochondrial dysfunction in pathophysiology of heart failure.

Authors:  Bo Zhou; Rong Tian
Journal:  J Clin Invest       Date:  2018-08-20       Impact factor: 14.808

Review 8.  Proteomics of Long-Lived Mammals.

Authors:  Gregory Tombline; Jonathan Gigas; Nicholas Macoretta; Max Zacher; Stephan Emmrich; Yang Zhao; Andrei Seluanov; Vera Gorbunova
Journal:  Proteomics       Date:  2020-01-09       Impact factor: 3.984

Review 9.  Enzymatic and nonenzymatic protein acetylations control glycolysis process in liver diseases.

Authors:  Juan Li; Tongxin Wang; Jun Xia; Weilei Yao; Feiruo Huang
Journal:  FASEB J       Date:  2019-08-01       Impact factor: 5.191

10.  Simultaneous Affinity Enrichment of Two Post-Translational Modifications for Quantification and Site Localization.

Authors:  Xueshu Xie; Samah Shah; Anja Holtz; Jacob Rose; Nathan Basisty; Birgit Schilling
Journal:  J Vis Exp       Date:  2020-02-27       Impact factor: 1.355

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