| Literature DB >> 29507546 |
Qianqian Zhao1,2, Tiancheng Zhan3, Zaian Deng1, Qianqian Li1, Yaming Liu1, Shaojie Yang4, Dengbo Ji3, Yan Li1,2.
Abstract
BACKGROUND: Carcinoembryonic antigen (CEA) is a glycoprotein associated with colorectal cancer (CRC). While the functions of its gene and protein have been fully characterized, its post-translational modifications in the context of CRC development remain undefined.Entities:
Keywords: Carcinoembryonic antigen; Colorectal cancer; Glycosylation; Lectin microarray
Year: 2018 PMID: 29507546 PMCID: PMC5834848 DOI: 10.1186/s12014-018-9182-4
Source DB: PubMed Journal: Clin Proteomics ISSN: 1542-6416 Impact factor: 3.988
Detailed information of participating colorectal cancer patients
| Stage | Gender M/F | Age (mean ± SD) | Other diseases (yes/no) | Adjacent tissue C(CEA) = 0.25 μg/ml | Tumor tissue C(CEA) = 0.25 μg/ml |
|---|---|---|---|---|---|
| I (17) | 6/11 | 58 ± 12 | 10/7 | 17 | 17 |
| II (14) | 7/7 | 63 ± 12 | 6/8 | 14 | 14 |
| III (9) | 5/4 | 63 ± 10 | 5/4 | 9 | 9 |
| IV (13) | 9/4 | 65 ± 10 | 11/2 | 13 | 13 |
M, male; F, female; C(CEA), the concentration of CEA; SD, standard deviation
Fig. 1Identification of lectins interacting with purified CEA. a Schematic presentation of lectin microarray for CEA glycosylation analysis. Lectin 1 and 2 bind two different glycosylation patterns of CEA. b Design of the lectin microarray containing 56 lectins. c Representative lectin microarray binding patterns of six different CEA concentrations. d Four representative lectins bind different concentrations of CEA. The smaller diagrams show the overall changes with the increase of CEA concentration. The red points in the dashed box show expanded portions of the small diagrams. Bars represent the mean values with standard deviation (SD). CY3-BSA and CY5-BSA are positive controls. Printing buffer 1 and 8 serve as negative controls. The color bar represents corresponding signal-to-noise value
Fig. 2Comparison of CEA glycosylation patterns in tumor tissues and tumor-adjacent normal tissues. a Distribution of lectins exhibiting significant changes in binding between CEA-A and CEA-T samples. Bars represent the mean values with standard error of mean (SEM). b Clustered heat map of the lectin CEA-binding profiles. Lectins are indicated on the vertical axis, and samples are indicated along the horizontal axis, with A and T indicating the tumor-adjacent normal sample and tumor tissue sample, respectively. The lectin rows were grouped according to lectin-binding patterns. Each square represents the intensity of a lectin binding glycosylation pattern on CEA within a sample. To clearly show the variation between the samples, the values of signal-to-noise ratios were transformed by Min–Max normalization. [yi = xi − min (xj)/max (xj) − min (xj), (1 ≤ i ≤ n, 1 ≤ j ≤ n); Max (xj) is the maximum value of the samples, min (xj) is the minimum value]. The color bar represents the scale. CEA-A, CEA in tumor-adjacent normal tissue; CEA-T, CEA in tumor tissue; A, tumor-adjacent normal tissue sample; T, tumor tissue sample
Fig. 3Receiver operating characteristic (ROC) curves for the discriminating tumor tissue samples from tumor-adjacent normal tissue samples using individual and combined lectins. a The area-under-the-curve (AUC), 95% confidence interval, sensitivity and specificity of 22 lectins alone. b The ROC is indicated for combination of 9 lectins
Fig. 4Correlations between lectins binding CEA and the stage of colorectal carcinoma. The bars represent the mean values with standard error of mean (SEM). A, tumor-adjacent normal tissue samples; T, tumor tissue samples