Literature DB >> 29506869

UK and Irish Y-STR population data-A catalogue of variant alleles.

Anastasia Aliferi1, Jim Thomson2, Andrew McDonald3, Vanessa Molin Paynter1, Steven Ferguson4, Des Vanhinsbergh5, Denise Syndercombe Court1, David Ballard6.   

Abstract

A total of 3128 Y-STR profiles from three UK and one Irish population have been analysed with the PowerPlex Y23 system and are reported here. Instances of haplotype sharing between apparently unrelated individuals were identified and further investigated with the use of the 5 additional markers within the Yfiler Plus kit, resulting in a reduction by 76% in the number of shared haplotypes. Furthermore, Yfiler Plus was also employed to verify locus deletions and duplications observed in Y23 genotypes while inconsistencies between the two kits were sequenced, revealing underlying Y23 primer binding site mutations in loci DYS392 and DYS576. Finally, the mechanism behind a previously reported population specific peak shift observed in DYS481 in South Asian samples has been evaluated and further investigated in a novel case of this phenomenon seen in a Black British individual featuring a different flanking region mutation.
Copyright © 2018 Elsevier B.V. All rights reserved.

Keywords:  DYS392; DYS481; DYS576; Mobility shift; Powerplex Y23; UK; Variant alleles; YSTR; Yfiler Plus

Mesh:

Year:  2018        PMID: 29506869     DOI: 10.1016/j.fsigen.2018.02.018

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  4 in total

1.  Haplotype diversity and phylogenetic characteristics for Guanzhong Han population from Northwest China via 38 Y-STRs using Yfiler™ Platinum Amplification System.

Authors:  Luyao Li; Lilan Yao; Xin He; Huilin Gong; Yuan Deng; Mei Luan; Guanglin He; Fuquan Jia; Pengyu Chen
Journal:  Mol Genet Genomic Med       Date:  2020-03-12       Impact factor: 2.183

2.  Population genetic analysis of 36 Y-chromosomal STRs yields comprehensive insights into the forensic features and phylogenetic relationship of Chinese Tai-Kadai-speaking Bouyei.

Authors:  Ya Luo; Yan Wu; Enfang Qian; Qian Wang; Qiyan Wang; Hongling Zhang; Xiaojuan Wang; Han Zhang; Meiqing Yang; Jingyan Ji; Zheng Ren; Ying Zhang; Jing Tang; Jiang Huang
Journal:  PLoS One       Date:  2019-11-08       Impact factor: 3.240

3.  Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye-labeled typing system including 41 Y-STRs and 3 Y-InDels.

Authors:  Yanfang Liu; Tingting Yu; Shuyan Mei; Xiaoye Jin; Qiong Lan; Yongsong Zhou; Yating Fang; Tong Xie; Jiabin Huang; Bofeng Zhu
Journal:  Mol Genet Genomic Med       Date:  2019-12-26       Impact factor: 2.183

4.  Profiling of 17 Y-STR loci in Mazandaran and Gilan provinces of Iran

Authors:  Minoo Sayyari; Ali Salehzadeh; Mohamad Amin Tabatabaiefar; Ali Abbasi
Journal:  Turk J Med Sci       Date:  2019-10-24       Impact factor: 0.973

  4 in total

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