Literature DB >> 29503177

Native RNA-Sequencing Throws its Hat into the Transcriptomics Ring.

Shobbir Hussain1.   

Abstract

De novo sequence-level surveys of transcriptomes have previously relied on sequencing via a DNA intermediate. While such methods can yield massive data sets, various problems mean that these do not always accurately reflect the true innate composition of transcriptomes. Enter Garalde et al., who present for the first time highly parallel native RNA-Sequencing (RNA-seq), with potentially disruptive future-implications for the transcriptomics field.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Keywords:  MinION; ONT; Oxford Nanopore Technologies; RNA-Seq; alternative splicing; epitranscriptome; epitranscriptomics; nanopore sequencing

Mesh:

Substances:

Year:  2018        PMID: 29503177     DOI: 10.1016/j.tibs.2018.02.007

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  5 in total

Review 1.  Going the Distance: Optimizing RNA-Seq Strategies for Transcriptomic Analysis of Complex Viral Genomes.

Authors:  Daniel P Depledge; Ian Mohr; Angus C Wilson
Journal:  J Virol       Date:  2018-12-10       Impact factor: 5.103

2.  Modern Approaches for Transcriptome Analyses in Plants.

Authors:  Diego Mauricio Riaño-Pachón; Hector Fabio Espitia-Navarro; John Jaime Riascos; Gabriel Rodrigues Alves Margarido
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

3.  High-Fidelity Nanopore Sequencing of Ultra-Short DNA Targets.

Authors:  Brandon D Wilson; Michael Eisenstein; H Tom Soh
Journal:  Anal Chem       Date:  2019-05-10       Impact factor: 6.986

Review 4.  Methodologies for Transcript Profiling Using Long-Read Technologies.

Authors:  Spyros Oikonomopoulos; Anthony Bayega; Somayyeh Fahiminiya; Haig Djambazian; Pierre Berube; Jiannis Ragoussis
Journal:  Front Genet       Date:  2020-07-07       Impact factor: 4.599

Review 5.  Third-Generation Sequencing: The Spearhead towards the Radical Transformation of Modern Genomics.

Authors:  Konstantina Athanasopoulou; Michaela A Boti; Panagiotis G Adamopoulos; Paraskevi C Skourou; Andreas Scorilas
Journal:  Life (Basel)       Date:  2021-12-26
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.