Literature DB >> 29497015

YopT domain of the PfhB2 toxin from Pasteurella multocida: protein expression, characterization, crystallization and crystallographic analysis.

Sanjeev Kumar1, Victoria Hedrick2, Seema Mattoo1.   

Abstract

Pasteurella multocida causes respiratory-tract infections in a broad range of animals, as well as opportunistic infections in humans. P. multocida secretes a multidomain toxin called PfhB2, which contains a YopT-like cysteine protease domain at its C-terminus. The YopT domain of PfhB2 contains a well conserved Cys-His-Asp catalytic triad that defines YopT family members, and shares high sequence similarity with the prototype YopT from Yersinia sp. To date, only one crystal structure of a YopT family member has been reported; however, additional structural information is needed to help characterize the varied substrate specificity and enzymatic action of this large protease family. Here, a catalytically inactive C3733S mutant of PfhB2 YopT that provides enhanced protein stability was used with the aim of gaining structural insight into the diversity within the YopT protein family. To this end, the C3733S mutant of PfhB2 YopT has been successfully cloned, overexpressed, purified and crystallized. Diffraction data sets were collected from native crystals to 3.5 Å resolution and a single-wavelength anomalous data set was collected from an iodide-derivative crystal to 3.2 Å resolution. Data pertaining to crystals belonging to space group P31, with unit-cell parameters a = 136.9, b = 136.9, c = 74.7 Å for the native crystals and a = 139.2, b = 139.2, c = 74.7 Å for the iodide-derivative crystals, are discussed.

Entities:  

Keywords:  AvrPphB; Pasteurella multocida; PfhB2 YopT; catalytic triad; cysteine protease

Mesh:

Substances:

Year:  2018        PMID: 29497015      PMCID: PMC5947697          DOI: 10.1107/S2053230X18000857

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  28 in total

Review 1.  Evolutionary lines of cysteine peptidases.

Authors:  A J Barrett; N D Rawlings
Journal:  Biol Chem       Date:  2001-05       Impact factor: 3.915

2.  Biochemical characterization of the Yersinia YopT protease: cleavage site and recognition elements in Rho GTPases.

Authors:  Feng Shao; Panayiotis O Vacratsis; Zhaoqin Bao; Katherine E Bowers; Carol A Fierke; Jack E Dixon
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-21       Impact factor: 11.205

3.  Pasteurella multocida toxin (PMT) activates RhoGTPases, induces actin polymerization and inhibits migration of human dendritic cells, but does not influence macropinocytosis.

Authors:  Dagmar Blöcker; Luciana Berod; Joachim W Fluhr; Joachim Orth; Marco Idzko; Klaus Aktories; Johannes Norgauer
Journal:  Int Immunol       Date:  2006-01-13       Impact factor: 4.823

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Signature-tagged mutagenesis of Pasteurella multocida identifies mutants displaying differential virulence characteristics in mice and chickens.

Authors:  Marina Harper; John D Boyce; Ian W Wilkie; Ben Adler
Journal:  Infect Immun       Date:  2003-09       Impact factor: 3.441

Review 6.  Bordetella filamentous hemagglutinin and fimbriae: critical adhesins with unrealized vaccine potential.

Authors:  Erich V Scheller; Peggy A Cotter
Journal:  Pathog Dis       Date:  2015-09-27       Impact factor: 3.166

7.  The crystal structure of Pseudomonas avirulence protein AvrPphB: a papain-like fold with a distinct substrate-binding site.

Authors:  Minfeng Zhu; Feng Shao; Roger W Innes; Jack E Dixon; Zhaohui Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-23       Impact factor: 11.205

Review 8.  The integration of macromolecular diffraction data.

Authors:  Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

Review 9.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

10.  Comparative analysis of Histophilus somni immunoglobulin-binding protein A (IbpA) with other fic domain-containing enzymes reveals differences in substrate and nucleotide specificities.

Authors:  Seema Mattoo; Eric Durrant; Mark J Chen; Junyu Xiao; Cheri S Lazar; Gerard Manning; Jack E Dixon; Carolyn A Worby
Journal:  J Biol Chem       Date:  2011-07-27       Impact factor: 5.157

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