Literature DB >> 29492184

Compressive Sensing Based Q-Space Resampling for Handling Fast Bulk Motion in Hardi Acquisitions.

Shireen Elhabian1, Clement Vachet1, Joseph Piven2, Martin Styner2,3, Guido Gerig4.   

Abstract

Diffusion-weighted (DW) MRI has become a widely adopted imaging modality to reveal the underlying brain connectivity. Long acquisition times and/or non-cooperative patients increase the chances of motion-related artifacts. Whereas slow bulk motion results in inter-gradient misalignment which can be handled via retrospective motion correction algorithms, fast bulk motion usually affects data during the application of a single diffusion gradient causing signal dropout artifacts. Common practices opt to discard gradients bearing signal attenuation due to the difficulty of their retrospective correction, with the disadvantage to lose full gradients for further processing. Nonetheless, such attenuation might only affect limited number of slices within a gradient volume. Q-space resampling has recently been proposed to recover corrupted slices while saving gradients for subsequent reconstruction. However, few corrupted gradients are implicitly assumed which might not hold in case of scanning unsedated infants or patients in pain. In this paper, we propose to adopt recent advances in compressive sensing based reconstruction of the diffusion orientation distribution functions (ODF) with under sampled measurements to resample corrupted slices. We make use of Simple Harmonic Oscillator based Reconstruction and Estimation (SHORE) basis functions which can analytically model ODF from arbitrary sampled signals. We demonstrate the impact of the proposed resampling strategy compared to state-of-art resampling and gradient exclusion on simulated intra-gradient motion as well as samples from real DWI data.

Entities:  

Keywords:  Artifact reduction; Compressive sensing; Diffusion weighted imaging; QBI; SHORE; Within-gradient motion

Year:  2016        PMID: 29492184      PMCID: PMC5826629          DOI: 10.1109/ISBI.2016.7493412

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  17 in total

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3.  Circos: an information aesthetic for comparative genomics.

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5.  Diffusion imaging with prospective motion correction and reacquisition.

Authors:  Thomas Benner; André J W van der Kouwe; A Gregory Sorensen
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7.  Continuous diffusion signal, EAP and ODF estimation via Compressive Sensing in diffusion MRI.

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8.  Spurious group differences due to head motion in a diffusion MRI study.

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9.  Comprehensive approach for correction of motion and distortion in diffusion-weighted MRI.

Authors:  G K Rohde; A S Barnett; P J Basser; S Marenco; C Pierpaoli
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10.  DTIPrep: quality control of diffusion-weighted images.

Authors:  Ipek Oguz; Mahshid Farzinfar; Joy Matsui; Francois Budin; Zhexing Liu; Guido Gerig; Hans J Johnson; Martin Styner
Journal:  Front Neuroinform       Date:  2014-01-30       Impact factor: 4.081

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  1 in total

1.  SHARD: Spherical Harmonic-based Robust Outlier Detection for HARDI Methods.

Authors:  Vishwesh Nath; Kurt G Schilling; Allison E Hainline; Prasanna Parvathaneni; Justin A Blaber; Ilwoo Lyu; Adam W Anderson; Hakmook Kang; Allen T Newton; Baxter P Rogers; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03
  1 in total

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