Literature DB >> 29485271

Antibacterial Drug Discovery: Some Assembly Required.

Rubén Tommasi1, Ramkumar Iyer1, Alita A Miller1.   

Abstract

Our limited understanding of the molecular basis for compound entry into and efflux out of Gram-negative bacteria is now recognized as a key bottleneck for the rational discovery of novel antibacterial compounds. Traditional, large-scale biochemical or target-agnostic phenotypic antibacterial screening efforts have, as a result, not been very fruitful. A main driver of this knowledge gap has been the historical lack of predictive cellular assays, tools, and models that provide structure-activity relationships to inform optimization of compound accumulation. A variety of recent approaches has recently been described to address this conundrum. This Perspective explores these approaches and considers ways in which their integration could successfully redirect antibacterial drug discovery efforts.

Keywords:  accumulation; drug discovery; efflux; novel antibacterials; permeation; rules of uptake

Mesh:

Substances:

Year:  2018        PMID: 29485271     DOI: 10.1021/acsinfecdis.8b00027

Source DB:  PubMed          Journal:  ACS Infect Dis        ISSN: 2373-8227            Impact factor:   5.084


  17 in total

Review 1.  Defining new chemical space for drug penetration into Gram-negative bacteria.

Authors:  Shibin Zhao; Justyna W Adamiak; Vincent Bonifay; Jitender Mehla; Helen I Zgurskaya; Derek S Tan
Journal:  Nat Chem Biol       Date:  2020-11-16       Impact factor: 15.040

2.  Compound Uptake into E. coli Can Be Facilitated by N-Alkyl Guanidiniums and Pyridiniums.

Authors:  Sarah J Perlmutter; Emily J Geddes; Bryon S Drown; Stephen E Motika; Myung Ryul Lee; Paul J Hergenrother
Journal:  ACS Infect Dis       Date:  2020-11-23       Impact factor: 5.084

Review 3.  Resisting resistance: gearing up for war.

Authors:  Aurijit Sarkar; Sylvie Garneau-Tsodikova
Journal:  Medchemcomm       Date:  2019-08-07       Impact factor: 3.597

4.  Fosfomycin Permeation through the Outer Membrane Porin OmpF.

Authors:  Vinaya Kumar Golla; Eulàlia Sans-Serramitjana; Karunakar Reddy Pothula; Lorraine Benier; Jayesh Arun Bafna; Mathias Winterhalter; Ulrich Kleinekathöfer
Journal:  Biophys J       Date:  2018-12-08       Impact factor: 4.033

5.  Gram-Negative Antibiotic Active Through Inhibition of an Essential Riboswitch.

Authors:  Stephen E Motika; Rebecca J Ulrich; Emily J Geddes; Hyang Yeon Lee; Gee W Lau; Paul J Hergenrother
Journal:  J Am Chem Soc       Date:  2020-06-08       Impact factor: 15.419

Review 6.  Facilitating Compound Entry as a Means to Discover Antibiotics for Gram-Negative Bacteria.

Authors:  Kristen A Muñoz; Paul J Hergenrother
Journal:  Acc Chem Res       Date:  2021-02-26       Impact factor: 22.384

7.  Antibacterial Discovery via Phenotypic DNA-Encoded Library Screening.

Authors:  Wesley G Cochrane; Patrick R Fitzgerald; Brian M Paegel
Journal:  ACS Chem Biol       Date:  2021-11-20       Impact factor: 5.100

Review 8.  β-lactam/β-lactamase inhibitor combinations: an update.

Authors:  Kamaleddin H M E Tehrani; Nathaniel I Martin
Journal:  Medchemcomm       Date:  2018-08-17       Impact factor: 3.597

9.  Antibacterial Discovery: 21st Century Challenges.

Authors:  Paul S Hoffman
Journal:  Antibiotics (Basel)       Date:  2020-04-28

10.  The Influence of Permeability through Bacterial Porins in Whole-Cell Compound Accumulation.

Authors:  Silvia Acosta-Gutiérrez; Igor V Bodrenko; Matteo Ceccarelli
Journal:  Antibiotics (Basel)       Date:  2021-05-26
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