Literature DB >> 29485216

Detecting host-parasitoid interactions in an invasive Lepidopteran using nested tagging DNA metabarcoding.

James J N Kitson1,2, Christoph Hahn1,3, Richard J Sands4,5, Nigel A Straw4, Darren M Evans1, David H Lunt2.   

Abstract

Determining the host-parasitoid interactions and parasitism rates for invasive species entering novel environments is an important first step in assessing potential routes for biocontrol and integrated pest management. Conventional insect rearing techniques followed by taxonomic identification are widely used to obtain such data, but this can be time-consuming and prone to biases. Here, we present a next-generation sequencing approach for use in ecological studies which allows for individual-level metadata tracking of large numbers of invertebrate samples through the use of hierarchically organised molecular identification tags. We demonstrate its utility using a sample data set examining both species identity and levels of parasitism in late larval stages of the oak processionary moth (Thaumetopoea processionea-Linn. 1758), an invasive species recently established in the United Kingdom. Overall, we find that there are two main species exploiting the late larval stages of oak processionary moth in the United Kingdom with the main parasitoid (Carcelia iliaca-Ratzeburg, 1840) parasitising 45.7% of caterpillars, while a rare secondary parasitoid (Compsilura concinnata-Meigen, 1824) was also detected in 0.4% of caterpillars. Using this approach on all life stages of the oak processionary moth may demonstrate additional parasitoid diversity. We discuss the wider potential of nested tagging DNA metabarcoding for constructing large, highly resolved species interaction networks.
© 2018 John Wiley & Sons Ltd.

Entities:  

Keywords:  biocontrol; invasive species; nested tagging; parasitism; species interactions

Mesh:

Year:  2018        PMID: 29485216     DOI: 10.1111/mec.14518

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  10 in total

Review 1.  Strategies for sample labelling and library preparation in DNA metabarcoding studies.

Authors:  Kristine Bohmann; Vasco Elbrecht; Christian Carøe; Iliana Bista; Florian Leese; Michael Bunce; Douglas W Yu; Mathew Seymour; Alex J Dumbrell; Simon Creer
Journal:  Mol Ecol Resour       Date:  2021-10-13       Impact factor: 8.678

Review 2.  Range-Expansion in Processionary Moths and Biological Control.

Authors:  Jetske G de Boer; Jeffrey A Harvey
Journal:  Insects       Date:  2020-04-28       Impact factor: 2.769

3.  Deciphering host-parasitoid interactions and parasitism rates of crop pests using DNA metabarcoding.

Authors:  Ahmadou Sow; Thierry Brévault; Laure Benoit; Marie-Pierre Chapuis; Maxime Galan; Armelle Coeur d'acier; Gérard Delvare; Mbacké Sembène; Julien Haran
Journal:  Sci Rep       Date:  2019-03-06       Impact factor: 4.379

Review 4.  Fish as predators and prey: DNA-based assessment of their role in food webs.

Authors:  Michael Traugott; Bettina Thalinger; Corinna Wallinger; Daniela Sint
Journal:  J Fish Biol       Date:  2020-07-08       Impact factor: 2.051

Review 5.  Identifying Molecular-Based Trophic Interactions as a Resource for Advanced Integrated Pest Management.

Authors:  Jason M Schmidt; Angelita Acebes-Doria; Brett Blaauw; Arash Kheirodin; Swikriti Pandey; Kylie Lennon; Amos D Kaldor; Pedro F S Toledo; Erin E Grabarczyk
Journal:  Insects       Date:  2021-04-16       Impact factor: 2.769

6.  Specific gut bacterial responses to natural diets of tropical birds.

Authors:  Kasun H Bodawatta; Irena Klečková; Jan Klečka; Kateřina Pužejová; Bonny Koane; Michael Poulsen; Knud A Jønsson; Katerina Sam
Journal:  Sci Rep       Date:  2022-01-13       Impact factor: 4.379

7.  Handling of targeted amplicon sequencing data focusing on index hopping and demultiplexing using a nested metabarcoding approach in ecology.

Authors:  Yasemin Guenay-Greunke; David A Bohan; Michael Traugott; Corinna Wallinger
Journal:  Sci Rep       Date:  2021-09-30       Impact factor: 4.379

8.  Diet composition and diversity does not explain fewer, smaller urban nestlings.

Authors:  Erin E Grabarczyk; Sharon A Gill; Maarten J Vonhof; Magdy S Alabady; Zengyan Wang; Jason M Schmidt
Journal:  PLoS One       Date:  2022-03-01       Impact factor: 3.240

9.  Individual-level specialisation and interspecific resource partitioning in bees revealed by pollen DNA metabarcoding.

Authors:  Jan Klečka; Michael Mikát; Pavla Koloušková; Jiří Hadrava; Jakub Straka
Journal:  PeerJ       Date:  2022-08-05       Impact factor: 3.061

Review 10.  Genomic biosurveillance of forest invasive alien enemies: A story written in code.

Authors:  Richard C Hamelin; Amanda D Roe
Journal:  Evol Appl       Date:  2019-09-10       Impact factor: 5.183

  10 in total

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