Literature DB >> 29484527

History, applications, and challenges of immune repertoire research.

Xiao Liu1, Jinghua Wu2.   

Abstract

The diversity of T and B cells in terms of their receptor sequences is huge in the vertebrate's immune system and provides broad protection against the vast diversity of pathogens. Immune repertoire is defined as the sum of T cell receptors and B cell receptors (also named immunoglobulin) that makes the organism's adaptive immune system. Before the emergence of high-throughput sequencing, the studies on immune repertoire were limited by the underdeveloped methodologies, since it was impossible to capture the whole picture by the low-throughput tools. The massive paralleled sequencing technology suits perfectly the researches on immune repertoire. In this article, we review the history of immune repertoire studies, in terms of technologies and research applications. Particularly, we discuss several aspects of challenges in this field and highlight the efforts to develop potential solutions, in the era of high-throughput sequencing of the immune repertoire.

Keywords:  BCR; High-throughput sequencing; Immune repertoire; TCR

Mesh:

Substances:

Year:  2018        PMID: 29484527     DOI: 10.1007/s10565-018-9426-0

Source DB:  PubMed          Journal:  Cell Biol Toxicol        ISSN: 0742-2091            Impact factor:   6.691


  20 in total

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3.  Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on B cell marker genes to predict prognosis and immunotherapy response in lung adenocarcinoma.

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4.  Single-Cell-Based High-Throughput Ig and TCR Repertoire Sequencing Analysis in Rhesus Macaques.

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5.  Related parameters of affinity and stability prediction of HLA-A*2402 restricted antigen peptides based on molecular docking.

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Review 6.  Unlocking immune-mediated disease mechanisms with transcriptomics.

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7.  A Comprehensive Analysis of the T and B Lymphocytes Repertoire Shaped by HIV Vaccines.

Authors:  Longlong Wang; Wei Zhang; Liya Lin; Xiao Li; Nitin K Saksena; Jinghua Wu; Shiyu Wang; Joseph G Joyce; Xiuqing Zhang; Huanming Yang; Jian Wang; I-Ming Wang; Xiao Liu
Journal:  Front Immunol       Date:  2018-09-26       Impact factor: 7.561

8.  TCR Repertoire Analysis Reveals Mobilization of Novel CD8+ T Cell Clones Into the Cancer-Immunity Cycle Following Anti-CD4 Antibody Administration.

Authors:  Hiroyasu Aoki; Satoshi Ueha; Shigeyuki Shichino; Haru Ogiwara; Shin-Ichi Hashimoto; Kazuhiro Kakimi; Satoru Ito; Kouji Matsushima
Journal:  Front Immunol       Date:  2019-01-24       Impact factor: 7.561

9.  High-throughput single-cell sequencing of paired TCRα and TCRβ genes for the direct expression-cloning and functional analysis of murine T-cell receptors.

Authors:  Julia Ludwig; Ann-Kathrin Huber; Ilka Bartsch; Christian E Busse; Hedda Wardemann
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Review 10.  Human immune repertoire in hepatitis B virus infection.

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