| Literature DB >> 29484195 |
Satomi Tani1, Carlos Piñeiro2, Yuzo Koketsu1.
Abstract
BACKGROUND: The objectives of our study were 1) to characterize culling and retention patterns in parities 0 to 6 in served females and farrowed sows in two herd groups, and 2) to quantify the factors associated with by-parity culling risks for both groups in commercial herds. Lifetime data from first-service to removal included 465,947 service records of 94,691 females served between 2008 and 2013 in 98 Spanish herds. Herds were categorized into two groups based on the upper 25th percentile of the herd means of annualized lifetime pigs weaned per sow: high-performing (> 24.7 pigs) and ordinary herds (≤ 24.7 pigs). Two-level log-binomial regression models were used to examine risk factors and relative risk ratios associated with by-parity culling risks.Entities:
Keywords: Culling risk; Lifetime data; Pigs born alive; Relative risk; Retention rate; Swine
Year: 2018 PMID: 29484195 PMCID: PMC5819191 DOI: 10.1186/s40813-018-0080-y
Source DB: PubMed Journal: Porcine Health Manag ISSN: 2055-5660
Reproductive data for female pigs in 98 Spanish herds
| Measurements | Range | |||
|---|---|---|---|---|
| N | Mean ± SEM | Minimum | Maximum | |
| Lifetime records | ||||
| Parity at removal | 94,691 | 4.6 ± 0.01 | 0 | 13 |
| Parity at culling | 80,845 | 4.7 ± 0.01 | 0 | 13 |
| Annualized culling rate, % | 94,691 | 44.4 ± 0.08 | – | – |
| Percentage of culled females, % | 94,691 | 85.4 ± 0.11 | – | – |
| Gilt age at first-servicea, days old | 87,814 | 251.7 ± 0.15 | 160 | 400 |
| Parity records | ||||
| Served parity | 465,947 | 2.6 ± 0.01 | 0 | 12 |
| Farrowed parity | 431,644 | 3.6 ± 0.01 | 1 | 13 |
| Number of pigs born aliveb | 371,252 | 12.1 ± 0.01 | 0 | 25 |
| Number of stillborn pigletsb | 371,224 | 0.9 ± 0.01 | 0 | 19 |
| Lactation length, daysb | 369,665 | 23.4 ± 0.01 | 0 | 41 |
| Weaning-to-first-service interval, daysb | 367,502 | 5.9 ± 0.01 | 0 | 35 |
aThe remaining records (94,691-N) were regarded as missing records
bThe remaining records (465,947-N) were regarded as missing records
By-parity culling risks, farrowing rates and retention rates (%) of first-served female pigs
| Served parity (from service prior to subsequent farrowing) | ||||||||
| Measurements | 0 | 1 | 2 | 3 | 4 | 5 | 6b | Total |
| Number of first-served female pigs | 94,691 | 81,897 | 72,622 | 63,909 | 54,731 | 44,573 | 30,733 | 465,947 |
| Re-served female pigs | 11,947 | 9492 | 6086 | 5125 | 4080 | 2895 | 1733 | 42,442 |
| Culled females without farrowing | 5667 | 4300 | 3369 | 3390 | 3133 | 3028 | 2446 | 27,414 |
| Dead females without farrowing | 1272 | 981 | 926 | 911 | 909 | 800 | 598 | 6889 |
| Re-service risks, % | 12.6 | 11.6 | 8.4 | 8.0 | 7.5 | 6.5 | 5.6 | 9.1 |
| Culling risks for pregnant pigs, % | 6.0 | 5.3 | 4.6 | 5.3 | 5.7 | 6.8 | 8.0 | 29.0 |
| Farrowed parity (from farrowing prior to subsequent service) | ||||||||
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | Total | |
| Number of sows farrowed in current paritya | 87,752 | 76,616 | 68,327 | 59,608 | 50,689 | 40,745 | 27,689 | 431,644 |
| Retention rates, % | 92.7 | 80.9 | 72.2 | 63.0 | 53.5 | 43.0 | 29.2 | – |
| Farrowing rates including re-served females, % | 92.7 | 93.6 | 94.1 | 93.3 | 92.6 | 91.4 | 90.1 | 92.6 |
| Culled females without subsequent service | 4370 | 3095 | 3507 | 4097 | 5365 | 9050 | 10,809 | 53,431 |
| Dead female records without subsequent service | 1485 | 899 | 911 | 780 | 751 | 962 | 644 | 6957 |
| Culling risks for farrowed sows, % | 5.0 | 4.0 | 5.1 | 6.9 | 10.6 | 22.2 | 39.0 | 56.4 |
aNumber of sows farrowed was calculated as the number of served records subtracted by the number of female pigs that died or were culled before farrowing
bParity 7 or higher are not shown in Table 2 because these variables are similar to parity 6 sows
Model selection for two-level mixed-effects log-binomial regression models for served gilts
| Model specification | pseudo-AIC | ||||
|---|---|---|---|---|---|
| Model for culling risk of served gilts | |||||
| Fixed effecta,b | Random effect | Parity | |||
| Model No. | AFS | HG | Interaction | Herds | 0 |
| AFS × HG | |||||
| 1 | ✓ | ✓ | 39187c | ||
| 2 | ✓ | ✓ | 41,896 | ||
| 3 | ✓ | ✓ | ✓ | ✓ | NC |
| 4 | ✓ | ✓ | ✓ | 39,189 | |
| COVTEST for final Model | <0.01 | ||||
AFS age at first-service, HG herd groups
aEntry years were included into all models
bThe univariate models were not shown because the AIC were higher than those shown in Models 1 and 2
cFinal model is selected by the lowest pseudo-AIC
NC means the models did not converge
Model selection for two-level mixed-effects log-binomial regression models for served sows
| Model specification | pseudo-AIC | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Model for culling risk of served sows | ||||||||||
| Fixed effecta,b | Random effect | Consecutive parities | ||||||||
| Model No. | HG | WSI | Interaction | Herds | 1 | 2 | 3 | 4 | 5 | 6 |
| HG × WSI | ||||||||||
| 1 | ✓ | ✓ | 31,377 | 26,055 | 25,598 | 23,283 | 21,565 | 16,510 | ||
| 2 | ✓ | ✓ | 31207c | 25,890 | 25,462 | 23,158 | 21,491 | 16,469 | ||
| 3 | ✓ | ✓ | ✓ | ✓ | 31,209 | 25887c | 25,464 | 23,154 | 21,489 | 16,465 |
| 4 | ✓ | ✓ | ✓ | 31,209 | 25,889 | 25462c | 23154c | 21489c | 16463c | |
| COVTEST for final Model | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 | ||||
HG herd groups, WSI weaning-to-first-service interval
aEntry years were included into all models
bThe univariate models were not shown because the AIC were higher than those shown in Models 1 and 2
cFinal model is selected by the lowest pseudo-AIC
Model selection for two-level mixed-effects log-binomial regression models for farrowed sows
| Model specification | pseudo-AIC | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Model for culling risk of farrowed sows | |||||||||||||
| Fixed effecta,b | Random effect | Consecutive parities | |||||||||||
| Model No. | HG | PBA | SB | Interaction | Interaction | Interaction | Herds | 1 | 2 | 3 | 4 | 5 | 6 |
| HG × PBA | HG × SB | PBA × SB | |||||||||||
| 1 | ✓ | ✓ | 34,280 | 24,293 | 26,657 | 28,691 | 32,820 | 39,007 | |||||
| 2 | ✓ | ✓ | 34,062 | 23,631 | 25,841 | 27,850 | 31,659 | NC | |||||
| 3 | ✓ | ✓ | 34,136 | 24,145 | 26,505 | 28,510 | 32,542 | 38,858 | |||||
| 4 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 33,970 | 23,516 | 25,717 | 27,716 | 31,472 | 37,658 |
| 5 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 33,976 | 23,511 | 25714c | 27,713 | 31,488 | 37,672 | |
| 6 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 33,967 | 23,534 | 25,729 | 27,727 | 31,484 | NC | |
| 7 | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | 33,968 | 23,512 | 25,718 | 27,713 | 31469c | 37655c | |
| 8 | ✓ | ✓ | ✓ | ✓ | ✓ | 33,974 | 23508c | 25,715 | 27710c | 31,486 | 37,670 | ||
| 9 | ✓ | ✓ | ✓ | ✓ | ✓ | 33,973 | 23,530 | 25,727 | 27,723 | 31,498 | NC | ||
| 10 | ✓ | ✓ | ✓ | ✓ | ✓ | 33,965 | 23,532 | 25,733 | 27,723 | 31,481 | NC | ||
| 11 | ✓ | ✓ | ✓ | ✓ | 34,067 | 23,611 | 25,818 | 27,835 | 31,646 | NC | |||
| 12 | ✓ | ✓ | ✓ | ✓ | 33964c | 23,537 | 25,745 | 27,731 | 31,486 | 37,668 | |||
| 13 | ✓ | ✓ | ✓ | ✓ | 34,140 | 24,146 | 26,494 | 28,507 | 32,545 | 38,857 | |||
| 14 | ✓ | ✓ | ✓ | ✓ | 33,971 | 23,528 | 25,730 | 27,719 | 31,498 | NC | |||
| COVTEST for Model | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 | <0.01 | |||||||
HG herd groups, PBA pigs born alive, SB stillborn piglets
aEntry years were included into all models
bThe univariate models were not shown because the AIC were higher than those shown in Models 1–3
cFinal model is selected by the lowest pseudo-AIC
NC means the models did not converge
Comparisons of culling risks (%) for served sows between either herd groups or weaning-to-first-service interval (WSI) groups, and the relative risk ratios for culling at different parities estimated by the models
| Parity 1 | Parity 2 | Parity 3 | Parity 4 | Parity 5 | Parity 6 | |
|---|---|---|---|---|---|---|
| Final model No. | Model 2 | Model 3 | Model 4 | Model 4 | Model 4 | Model 4 |
| Groups | Culling risks (± SE), % | |||||
| Herd groups | ||||||
| High-performing herds | – | 4.1 (0.39)b | 5.3 (0.42) | 5.3 (0.45)b | 6.8 (0.53)b | 7.7 (0.64)b |
| Ordinary herds | – | 5.2 (0.29)a | 6.1 (0.30) | 6.8 (0.36)a | 8.2 (0.41)a | 10.0 (0.53)a |
| WSI groups | ||||||
| 0–6 days | 3.6 (0.19)b | 3.5 (0.19)b | 4.3 (0.20)b | 4.5 (0.22)b | 5.9 (0.26)b | 7.0 (0.33)b |
| 7 days or more | 5.8 (0.32)a | 6.1 (0.40)a | 7.5 (0.44)a | 8.1 (0.51)a | 9.5 (0.59)a | 10.9 (0.76)a |
| Groups | Relative risk ratio for culling (95% CI) | |||||
| Herd groups | ||||||
| High-performing herds | – | NA | 0.88 (0.73–1.05) | 0.79 (0.65–0.95) | 0.82 (0.69–0.98) | 0.77 (0.64–0.93) |
| Ordinary herds | – | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
| WSI groups | ||||||
| 0–6 days | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
| 7 days or more | 1.60 (1.50–1.72) | NA | 1.75 (1.61–1.91) | 1.81 (1.65–1.99) | 1.63 (1.47–1.80) | 1.56 (1.39–1.75) |
SE standard error, CI confidence interval
NA Relative risk ratios at parity 2 were not shown because there was a two-way interaction at parity 2
a,bMean values within a column followed by different letters differ (P < 0.05)
Comparisons of culling risks (%) for farrowed sows between either herd groups or stillborn piglet groups, and the relative risk ratios for culling at different parities estimated by the modelsd
| Parity 1 | Parity 2 | Parity 3 | Parity 4 | Parity 5 | Parity 6 | |
|---|---|---|---|---|---|---|
| Final model No. | Model 12 | Model 8 | Model 5 | Model 8 | Model 7 | Model 7 |
| Groups | Culling risks (± SE) | |||||
| Herd groups | ||||||
| High-performing herds | – | 5.1 (0.53)a | 7.0 (0.68)a | 8.8 (0.94)a | 12.4 (1.28)a | 20.9 (2.78)a |
| Ordinary herds | – | 3.6 (0.27)b | 4.5 (0.31)b | 6.2 (0.43)b | 9.5 (0.63)b | 15.3 (1.23)b |
| Pigs born alive groups | ||||||
| 16 or more | 4.3 (0.44)b | 2.5 (0.24)c | 3.1 (0.26)c | 4.4 (0.34)c | 6.5 (0.51)c | 11.4 (0.99)c |
| 9–15 | 4.3 (0.23)b | 3.3 (0.21)b | 4.3 (0.25)b | 5.6 (0.36)b | 8.6 (0.53)b | 16.2 (1.25)b |
| 8 or fewer | 7.1 (0.40)a | 9.4 (0.62)a | 13.1 (0.82)a | 16.2 (1.09)a | 23.0 (1.46)a | 31.1 (2.42)a |
| Stillborn piglet groups | ||||||
| 0 | 4.3 (0.24)b | 3.3 (0.22)c | 4.6 (0.28)b | 6.0 (0.40)c | 9.2 (0.60)b | 16.7 (1.32)b |
| 1–2 | 4.7 (0.29)b | 3.9 (0.27)b | 5.0 (0.32)b | 6.9 (0.46)b | 9.9 (0.65)b | 17.6 (1.39)b |
| 3 or more | 6.5 (0.62)a | 6.1 (0.49)a | 7.7 (0.54)a | 9.7 (0.68)a | 14.0 (1.02)a | 19.4 (1.63)a |
SE standard error
a-cMean values within a column followed by different letters differ (P < 0.05)
dRelative risk ratios were not shown because there were two-way interactions in all parities
Comparisons of culling risks (%) between herd groups and pigs born alive groups for farrowed sows in parities 2 to 6
| Pigs born alive groups | |||
|---|---|---|---|
| 8 or fewer | 9–15 | 16 or more | |
| Herd groups | Culling risks (± SE), % | ||
| Parity 2 | |||
| High-performing herds | 12.6 (1.36)ax | 3.7 (0.39)y | 2.8 (0.38)y |
| Ordinary herds | 7.0 (0.52)bx | 3.0 (0.21)y | 2.3 (0.30)y |
| Parity 3 | |||
| High-performing herds | 18.2 (1.87)ax | 5.2 (0.51)ay | 3.6 (0.42)z |
| Ordinary herds | 9.4 (0.67)bx | 3.6 (0.23)by | 2.7 (0.31)y |
| Parity 4 | |||
| High-performing herds | 21.3 (2.38)ax | 6.8 (0.73)ay | 4.7 (0.56)z |
| Ordinary herds | 12.3 (0.91)bx | 4.7 (0.32)by | 4.1 (0.41)y |
| Parity 5 | |||
| High-performing herds | 28.7 (3.06)ax | 10.0 (1.03)y | 6.6 (0.78)z |
| Ordinary herds | 18.5 (1.26)bx | 7.4 (0.48)y | 6.3 (0.61)y |
| Parity 6 | |||
| High-performing herds | 36.1 (4.82)x | 19.9 (2.63)y | 12.7 (1.78)z |
| Ordinary herds | 26.8 (2.14)x | 13.2 (1.04)y | 10.2 (1.00)z |
a,bMean values within a column followed by different letters differ (P < 0.05)
x-zMean values within a row followed by different letters differ (P < 0.05)
Comparisons of culling risks (%) between pigs born alive groups and stillborn piglets groups for farrowed sows in parities 1 and 5–6
| stillborn piglets groups | |||
|---|---|---|---|
| 0 | 1–2 | 3 or more | |
| Pigs born alive groups | Culling risks (± SE), % | ||
| Parity 1 | |||
| 8 or fewer | 5.7 (0.37)ay | 5.9 (0.43)ay | 10.5 (0.74)ax |
| 9–15 | 3.7 (0.20)by | 4.0 (0.23)by | 5.2 (0.39)bx |
| 16 or more | 3.7 (0.34)b | 4.3 (0.46)ab | 5.0 (1.20)b |
| Parity 5 | |||
| 8 or fewer | 21.6 (1.48)ay | 20.7 (1.54)ay | 27.3 (1.93)ax |
| 9–15 | 6.8 (0.44)bz | 7.8 (0.50)by | 11.9 (0.81)bx |
| 16 or more | 5.3 (0.48)cy | 6.1 (0.55)cxy | 8.4 (1.12)bx |
| Parity 6 | |||
| 8 or fewer | 30.5 (2.42)a | 30.4 (2.43)a | 32.4 (2.56)a |
| 9–15 | 14.4 (1.13)bz | 15.8 (1.24)by | 18.6 (1.48)bx |
| 16 or more | 10.7 (0.99)c | 11.3 (1.05)c | 12.2 (1.51)c |
a-cMean values within a column followed by different letters differ (P < 0.05)
x-zMean values within a row followed by different letters differ (P < 0.05)