| Literature DB >> 29479468 |
K Boeta-Lopez1, J Duran1, D Elizondo1, E Gonzales1, A Rentfro1, A E Schwarzbach1, S Nair1.
Abstract
Objective: The objective of the study is to investigate the association of interleukin-6 (IL6) promoter single-nucleotide polymorphisms rs1800797 (-597 G/A) and rs1800796 (-572 G/C) with obesity or metabolic syndrome in Mexican-Americans.Entities:
Keywords: Genetics; inflammation; interleukin‐6; obesity
Year: 2017 PMID: 29479468 PMCID: PMC5818745 DOI: 10.1002/osp4.138
Source DB: PubMed Journal: Obes Sci Pract ISSN: 2055-2238
Published associations between IL6 SNPs and obesity or metabolic traits
| IL6 SNP | First author (Reference) | Ethnicity | Associated genotype | Associated phenotype |
|---|---|---|---|---|
| rs1800797 | Illig T. | German | GG | Type 2 diabetes |
| Phillips C.M. | French | GG | Metabolic syndrome | |
| rs1800796 | Tanaka C. | Japanese | GG | Systolic blood pressure and carotid intima‐medial thickness |
| Hamid Y.H. | Danes | CC | High insulinogenic index | |
| Ramirez‐Lopez G. | Mexican | CC | Hyperglycaemia | |
| Yin Y.W. | Asian | GG | Type 2 diabetes | |
| Yang X. | Asian | GG | Hypertension and obesity | |
| Ma H. | Asian | GG | Hypertension | |
| Haplotype rs1800797/796*/795† | Hamid Y.H. | Danes | GCG | Type 2 diabetes |
| Ramirez‐Lopez G. | Mexican | GCG | Hyperglycaemia and obesity | |
| Haplotype rs1800797/795† | Zamora‐Ginez I. | Mexican | GG | Type 2 diabetes |
| Saxena M. | Indian | GG | Type 2 diabetes |
796*, rs1800796; 795†, rs1800795.
IL6, interleukin‐6; SNP, single‐nucleotide polymorphism.
Anthropometric and clinical characteristics of Mexican‐Americans studied
| Characteristics | Subjects with phenotype data ( | Median ± SD | Q1/Q3 | Min/Max |
|---|---|---|---|---|
| Age (years) | All subjects (437) | 17 ± 8.26 | 15/21 | 14/60 |
| Female (291) | 17 ± 8.70 | 15/22 | 14/60 | |
| Male (146) | 17 ± 7.29 | 15/20 | 14/54 | |
| BMI (kg m−2) | All subjects (436) | 24.94 ± 6.55 | 22.29/29.87 | 15.68/55.24 |
| Female (290) | 24.56 ± 6.51 | 22.2/29.56 | 17.17/53.13 | |
| Male (146) | 25.91 ± 6.64 | 22.51/30.23 | 15.68/55.24 | |
| WC (cm) | All subjects (436) | 83 ± 16.83 | 75.5/95.63 | 30/167 |
| Female (290) | 81.75 ± 15.6 | 75/94 | 40.5/167 | |
| Male (146) | 85.3 ± 18.92 | 77.63/100.5 | 30/160 | |
| SBP (mmHg) | All subjects (437) | 110 ± 12.29 | 101/120 | 85/156 |
| Female (291) | 110 ± 11.38 | 100.5/115.5 | 85/153 | |
| Male (146) | 116 ± 13.26 | 104/123 | 85/156 | |
| DBP (mmHg) | All subjects (437) | 69 ± 9.74 | 63/76 | 40/97 |
| Female (291) | 69 ± 9.34 | 63/74 | 40/96 | |
| Male (146) | 70 ± 10.27 | 66/78.75 | 45/97 | |
| HOMA‐IR | All subjects (374) | 2.05 ± 2.87 | 1.21/3.39 | 0.02/36.89 |
| Female (246) | 2.15 ± 3.18 | 1.36/3.24 | 0.13/36.89 | |
| Male (128) | 1.86 ± 2.16 | 1.09/3.44 | 0.02/12.53 | |
| AST (U L−1) | All subjects (230) | 21 ± 16.16 | 16/28 | 7/157 |
| Female (153) | 19 ± 17.75 | 15/26.25 | 7/157 | |
| Male (77) | 25 ± 12.69 | 18/32 | 12/68 | |
| ALT (U L−1) | All subjects (230) | 33 ± 18.73 | 28/39 | 2.4/164 |
| Female (153) | 31 ± 18.42 | 28/35 | 2.4/162 | |
| Male (77) | 36 ± 18.86 | 33/44 | 21/164 | |
| Cholesterol (mg dL−1) | All subjects (350) | 149 ± 34.88 | 131/171 | 81/460 |
| Female (231) | 147 ± 37.24 | 132/171 | 89/460 | |
| Male (119) | 151 ± 29.89 | 130/171.5 | 81/230 | |
| Triglycerides (mg dL−1) | All subjects (349) | 68 ± 51.12 | 48/95 | 18/403 |
| Female (230) | 64.5 ± 43.64 | 46/92.75 | 25/281 | |
| Male (119) | 72 ± 62.16 | 52/111.5 | 18/403 | |
| HDL (mg dL−1) | All subjects (350) | 46 ± 11.85 | 40/55 | 14/97 |
| Female (231) | 47 ± 11.86 | 41/56 | 14/97 | |
| Male (119) | 44 ± 11.5 | 38/53 | 24/89 | |
| LDL (mg dL−1) | All subjects (350) | 86.5 ± 25.52 | 72/103.85 | 38/211 |
| Female (231) | 86 ± 26.53 | 72/103 | 38/211 | |
| Male (119) | 88.4 ± 23.53 | 72.8/106 | 45/163.2 | |
| Glucose (mg dL−1) | All subjects (416) | 90 ± 16.76 | 83.06/96.04 | 43.06/265.95 |
| Female (276) | 89 ± 16.07 | 83/95.25 | 43/228 | |
| Male (140) | 92 ± 18.14 | 85/97 | 65/266 | |
| Plasma IL6 (pg mL−1) | All subjects (128) | 3.68 ± 22.21 | 1.52/14.98 | 0.18/125.1 |
| Female (84) | 3.58 ± 18.83 | 1.6/10.43 | 0.2/99.19 | |
| Male (44) | 4.17 ± 27.09 | 1.46/27.01 | 0.18/125.1 | |
| hs‐CRP (mg L−1) | All subjects (267) | 0.66 ± 4.93 | 0.35/1.77 | 0.11/57.42 |
| Female (171) | 0.76 ± 5.92 | 0.35/2.23 | 0.16/57.42 | |
| Male (96) | 0.53 ± 1.95 | 0.35/1.27 | 0.11/14.8 |
Of the 437 subjects, 394 were between age 14 and 30 years (90.2% characterized as mostly young), and 43 were older than 30 years (9.8%). Three hundred subjects were between age 14 and 19 years, 94 between age 20 and 30 years, 26 between age 30 and 40 years and 17 older than 40 years.
ALT, alanine aminotransferase; AST, aspartate aminotransferase; DBP, diastolic blood pressure; HDL, high‐density lipoprotein cholesterol; HOMA‐IR, homeostasis model assessment of insulin resistance; hs‐CRP, high‐sensitive C‐reactive protein; IL6, interleukin‐6; LDL, low‐density lipoprotein cholesterol; Max, maximum values; Min, minimum values; SBP, systolic blood pressure; SD, standard deviation; Q1, 1st quartile; Q3, 3rd quartile; WC, waist circumference.
Alleles, allele frequencies and HWE calculations for rs1800797 and rs1800796
| SNP | M/m alleles | M/M (%) | M/m (%) | m/m (%) | MAF |
HWE |
|---|---|---|---|---|---|---|
| rs1800797 | G/A | 294 (68.53) | 122 (28.44) | 13 (3.03) | 0.17 | 0.87 |
| rs1800796 | G/C | 225 (52.57) | 165 (38.55) | 38 (8.88) | 0.28 | 0.34 |
HWE, Hardy–Weinberg equilibrium; M, major allele; m, minor allele; MAF, minor allele frequency; SNP, single‐nucleotide polymorphism.
Association of SNPs with the phenotypes of obesity categorized by body mass index
| SNP | Test | Non‐obese phenotype ( | Overweight/obese phenotype ( | OR (95% CI) |
| Permutation |
|---|---|---|---|---|---|---|
| rs1800797 | MAF (A‐allele) | 0.18 | 0.16 | 0.85 | 0.41 | 0.63 |
| Additive model | 0.92 (0.51–1.67) | 0.78 | 0.95 | |||
| Dominant model AA + AG vs. GG | 69/135 | 65/156 | 0.80 (0.53–1.21) | 0.29 | 0.50 | |
| Recessive model AA vs. AG + GG | 6/198 | 6/215 | 0.90 (0.28–2.94) | 0.87 | 0.98 | |
| rs1800796 | MAF (C‐allele) | 0.26 | 0.30 | 1.21 | 0.22 | 0.38 |
| Additive model | 1.10 (0.77–1.56) | 0.60 | 0.84 | |||
| Dominant model CC + CG vs. GG | 89/115 | 113/108 | 1.41 (0.95–2.07) | 0.09 | 0.17 | |
| Recessive model CC vs. CG + GG | 18/186 | 20/201 | 1.03 (0.52–2.04) | 0.93 | 1.0 |
Associations were adjusted for age and gender.
CI, confidence interval; MAF, minor allele frequency; OR, odds ratio; SNP, single‐nucleotide polymorphism.
Association of SNPs with the phenotypes of obesity categorized by waist circumference
| SNP | Test | Non‐centrally obese phenotype ( | Centrally obese phenotype ( | OR (95% CI) |
| Permutation |
|---|---|---|---|---|---|---|
| rs1800797 | MAF (A‐allele) | 0.19 | 0.15 | 0.78 | 0.17 | 0.31 |
| Additive model | 1.08 (0.60–1.95) | 0.79 | 0.95 | |||
| Dominant model AA + AG vs. GG | 74/134 | 60/157 | 0.70 (0.46–1.05) | 0.09 | 0.17 | |
| Recessive model AA vs. AG + GG | 5/203 | 7/210 | 1.32 (0.41–4.25) | 0.64 | 0.90 | |
| SNP | Test | Non‐centrally obese phenotype ( | Centrally obese phenotype ( | OR (95% CI) |
| Permutation |
| rs1800796 | MAF (C‐allele) | 0.25 | 0.32 | 1.44 |
|
|
| Additive model | 1.29 (0.91–1.83) | 0.15 | 0.26 | |||
| Dominant model CC + CG vs. GG | 87/123 | 115/100 | 1.62 (1.11–2.39) |
|
| |
| Recessive model CC vs. CG + GG | 16/194 | 22/193 | 1.37 (0.70–2.69) | 0.36 | 0.59 |
Associations were adjusted for age and gender.
CI, confidence interval; MAF, minor allele frequency; OR, odds ratio; SNP, single‐nucleotide polymorphism. Bolded P‐values <0.05, and statistically significant.
Association of SNPs with metabolic traits
| rs1800797 | rs1800796 | ||||||
|---|---|---|---|---|---|---|---|
| Metabolic traits ( | OR (95% CI) |
| Permutation | Metabolic traits ( | OR (95% CI) |
| Permutation |
| Systolic blood pressure (mmHg) | Systolic blood pressure (mmHg) | ||||||
| All subjects (424) | 0.89 (0.24–3.31) | 0.87 | 0.90 | All subjects (423) | 0.92 (0.42–2.04) | 0.84 | 0.87 |
| Female (279) | 0.91 (0.22–3.80) | 0.90 | 0.88 | Female (279) | 0.98 (0.30–3.26) | 0.98 | 0.92 |
| Male (145) | 0.0001 (0–*) | 1.0 | 1.0 | Male (144) | 0.73 (0.21–2.54) | 0.63 | 0.46 |
| Diastolic blood pressure (mmHg) | Diastolic blood pressure (mmHg) | ||||||
| All subjects (424) | 1.13 (0.34–3.76) | 0.85 | 0.88 | All subjects (423) | 1.31 (0.65–2.62) | 0.45 | 0.54 |
| Female (279) | 1.43 (0.43–4.73) | 0.56 | 0.56 | Female (279) | 0.75 (0.23–2.4) | 0.63 | 0.59 |
| Male (145) | 0.0001 (0–*) | 1.0 | 1.0 | Male (144) | 2.25 (0.84–5.98) | 0.10 | 0.08 |
| HOMA‐IR | HOMA‐IR | ||||||
| All subjects (363) | 0.55 (0.18–1.64) | 0.28 | 0.48 | All subjects (361) | 0.35 (0.16–0.77) |
|
|
| Female (236) | 0.61 (0.2–1.8) | 0.37 | 0.60 | Female (234) | 0.22 (0.06–0.84) |
|
|
| Male (127) | 6.1e−005 (0–*) | 1.0 | 1.0 | Male (127) | 0.68 (0.23–2.01) | 0.49 | 0.54 |
| Aspartate aminotransferase (U L−1) | Aspartate aminotransferase (U L−1) | ||||||
| All subjects (220) | 0.0001 (0–*) | 1.0 | 1.0 | All subjects (228) | 1.12 (0.33–3.87) | 0.85 | 0.66 |
| Female (144) | 0.0001 (0–*) | 1.0 | 0.99 | Female (151) | 1.31 (0.35–4.98) | 0.69 | 0.47 |
| Male (76) | NA | NA | 1.0 | Male (77) | 0.0001 (0–*) | 1.0 | 0.91 |
| Alanine aminotransferase (U L−1) | Alanine aminotransferase (U L−1) | ||||||
| All subjects (220) | 7.93e−005 (0–*) | 1.0 | 1.0 | All subjects (228) | 0.77 (0.25–2.35) | 0.65 | 0.71 |
| Female (144) | 7.78e−005 (0–*) | 1.0 | 1.0 | Female (151) | 0.83 (0.27–2.63) | 0.76 | 0.78 |
| Male (76) | NA | NA | 1.0 | Male (77) | 0.0001 (0–*) | 1.0 | 0.96 |
| Cholesterol (mg dL−1) | Cholesterol (mg dL−1) | ||||||
| All subjects (338) | 5.07e−005 (0–*) | 1.0 | 1.0 | All subjects (341) | 1.0 (0.46–2.15) | 1.0 | 0.94 |
| Female (220) | 6.03e−005 (0–*) | 1.0 | 1.0 | Female (223) | 0.79 (0.30–2.08) | 0.63 | 0.65 |
| Male (118) | NA | NA | 1.0 | Male (118) | 2.03 (0.56–7.34) | 0.28 | 0.12 |
| Triglycerides (mg dL−1) | Triglycerides (mg dL−1) | ||||||
| All subjects (337) | 0.0001 (0–*) | 1.0 | 1.0 | All subjects (340) | 0.0001 (0–*) | 1.0 | 0.83 |
| Female (219) | 0.0001 (0–*) | 0.99 | 0.98 | Female (222) | 0.0001 (0–*) | 1.0 | 0.54 |
| Male (118) | NA | NA | 1.0 | Male (118) | 0.0001 (0–*) | 1.0 | 0.40 |
| HDL (mg dL−1) | HDL (mg dL−1) | ||||||
| All subjects (338) | 7.09e−005 (0–*) | 1.0 | 1.0 | All subjects (341) | 1.16 (0.70–1.91) | 0.57 | 0.81 |
| Female (220) | 6.96e−005 (0–*) | 1.0 | 1.0 | Female (223) | 1.23 (0.66–2.32) | 0.51 | 0.64 |
| Male (118) | NA | NA | 1.0 | Male (118) | 0.86 (0.36–2.07) | 0.74 | 0.71 |
| LDL (mg dL−1) | LDL (mg dL−1) | ||||||
| All subjects (338) | 1.05 (0.49–2.28) | 0.90 | 1.0 | All subjects (341) | 1.09 (0.72–1.64) | 0.70 | 0.90 |
| Female (220) | 1.06 (0.48–2.32) | 0.89 | 0.99 | Female (223) | 1.13 (0.69–1.87) | 0.63 | 0.83 |
| Male (118) | NA | NA | 1.0 | Male (118) | 0.99 (0.45–2.19) | 0.97 | 0.95 |
| Glucose (mg dL−1) | Glucose (mg dL−1) | ||||||
| All subjects (403) | 1.63 (0.44–5.97) | 0.46 | 0.45 | All subjects (402) | 0.0001 (0–*) | 1.0 | 0.76 |
| Female (264) | 1.78 (0.48–6.61) | 0.39 | 0.40 | Female (264) | 0.0001 (0–*) | 1.0 | 0.68 |
| Male (139) | 0.0002 (0–*) | 1.0 | 0.95 | Male (138) | 0.0003 (0–*) | 1.0 | 0.89 |
P‐values for the all subjects group were adjusted for age, gender and waist circumference. P‐values for female and male subjects separately were adjusted for age and waist circumference. NA, frequency of the allele is less than 5.
Infinity.
CI, confidence interval; HDL, high‐density lipoprotein cholesterol; HOMA‐IR, homeostasis model assessment of insulin resistance; LDL, low‐density lipoprotein cholesterol; OR, odds ratio; SNP, single‐nucleotide polymorphism. Bolded P values are statistically significant (< 0.05).
Association of SNPs' genotypes with plasma IL6, hs‐CRP and liver enzymes levels
| Trait | SNP and genotypes |
| Mean ± SD | Genotypic combination |
|
|---|---|---|---|---|---|
| Plasma IL6 (pg mL−1) | rs1800797 | ||||
| AA | 3 | 9.19 ± 5.06 |
AA vs. GG + AG |
0.48 | |
| AG | 31 | 12.61 ± 15.05 | |||
| GG | 69 | 3.97 ± 4.67 | |||
| rs1800796 | |||||
| CC | 12 | 1.97 ± 1.07 |
CC vs. GG + CG |
| |
| CG | 45 | 6.33 ± 7.59 | |||
| GG | 48 | 6.87 ± 8.24 | |||
| hs‐CRP (mg L−1) | rs1800797 | ||||
| AA | 3 | 0.77 ± 0.01 | AA vs. GG + AG AA + AG vs. GG |
0.48 | |
| AG | 60 | 0.67 ± 0.53 | |||
| GG | 156 | 0.86 ± 0.73 | |||
| rs1800796 | |||||
| CC | 22 | 1.34 ± 1.56 |
CC vs. GG + CG |
0.10 | |
| CG | 89 | 0.86 ± 0.68 | |||
| GG | 112 | 0.69 ± 0.55 | |||
| AST (U L−1) | rs1800797 | ||||
| AA | 6 | 23.83 ± 4.31 |
AA vs. GG + AG |
0.71 | |
| AG | 69 | 24.80 ± 12.86 | |||
| GG | 148 | 24.51 ± 15.04 | |||
| rs1800796 | |||||
| CC | 21 | 27.57 ± 30.59 |
CC vs. GG + CG |
0.63 | |
| CG | 94 | 22.82 ± 10.12 | |||
| GG | 116 | 25.47 ± 16.30 | |||
| ALT (U L−1) | rs1800797 | ||||
| AA | 6 | 34.50 ± 5.54 |
AA vs. GG + AG |
0.47 | |
| AG | 69 | 37.54 ± 20.45 | |||
| GG | 148 | 35.91 ± 15.52 | |||
| rs1800796 | |||||
| CC | 21 | 37.43 ± 24.29 |
CC vs. GG + CG |
0.89 | |
| CG | 94 | 37.37 ± 19.78 | |||
| GG | 116 | 36.05 ± 16.65 | |||
Plasma levels of IL6, hs‐CRP and liver enzymes (AST and ALT) were compared between various genotype combinations for each SNP. Student's t‐tests were used to assess statistical significance. IL6 and hs‐CRP outliers were removed from the associations. Table S1 shows the data including outliers. Values above 1.5 times the interquartile range were categorized as outliers.
ALT, alanine aminotransferase; AST, aspartate aminotransferase; hs‐CRP, high‐sensitive C‐reactive protein; IL6, interleukin‐6; SD, standard deviation; SNP, single‐nucleotide polymorphism. Bolded P values are statistically significant (< 0.05).
Figure 1Comparison of mean plasma interleukin‐6 (IL6) and high‐sensitive C‐reactive protein (hs‐CRP) levels between genotypes for each single‐nucleotide polymorphism. A. Plasma IL6 and hs‐CRP levels were compared between rs1800797 genotypes. Plasma IL6 was significantly higher in rs1800797 A (protective allele against obesity and metabolic traits)‐carriers than in G‐homozygotes (P = 0.002), and hs‐CRP was significantly lower in rs1800797 A‐carriers than in G‐homozygotes (P = 0.04). B. Plasma IL6 and hs‐CRP levels were compared between rs1800796 genotypes. Plasma IL6 was significantly lower in rs1800796 C (risk allele for obesity and metabolic traits)‐homozygotes than in G‐carriers (P = 6.6e−07), and hs‐CRP was significantly higher in C‐carriers than in G‐homozygous (P = 0.01).
Figure 2Comparison of liver enzyme (aspartate aminotransferase [AST] and alanine aminotransferase [ALT]) levels for each interleukin‐6 (IL6) single‐nucleotide polymorphism genotype. A. Liver enzymes were compared between rs1800797 genotypes. Levels of liver enzymes did not differ between rs1800797 genotypes, but a trend for higher plasma levels of liver enzymes was observed in rs1800797 GG (trend for higher hs‐CRP and lower IL6) genotypes. B. Liver enzymes were compared between rs1800796 genotypes. Plasma levels of liver enzymes did not differ between rs1800796 genotypes, but a trend of higher plasma levels of liver enzymes was observed in rs1800796 C (risk allele for waist circumference, homeostasis model assessment of insulin resistance, higher hs‐CRP and lower IL6)‐carriers. White circles refer to outliers; black circles refer to mean.